Top 10 genes with highest correlation to Rv1474c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2621c/- | (cc=0.4614) | info on Rv2621c/- |
| Rv1069c/- | (cc=0.4602) | info on Rv1069c/- |
| Rv3075c/- | (cc=0.4515) | info on Rv3075c/- |
| Rv2668/- | (cc=0.4503) | info on Rv2668/- |
| Rv3160c/- | (cc=0.4454) | info on Rv3160c/- |
| Rv2141c/- | (cc=0.4311) | info on Rv2141c/- |
| Rv1193/fadD36 | (cc=0.4289) | info on Rv1193/fadD36 |
| Rv2680/- | (cc=0.4203) | info on Rv2680/- |
| Rv3385c/vapB46 | (cc=0.4134) | info on Rv3385c/vapB46 |
| Rv3848/- | (cc=0.4098) | info on Rv3848/- |
Correlation of Rv1474c/- with Rv1069c/-
Normalized LFCs for Rv1474c/-:
(description and provenance of datasets)
| Rv1474c/- | Rv1069c/- | |
| Fe_supp_jason_reseq | -0.617 | 0.51 |
| low_pH_jason_reseq | 0.579 | -1.116 |
| NO_jason_reseq | -2.318 | -2.129 |
| B6_jason_reseq | -0.813 | -0.505 |
| MHCII_jason_reseq | -1.359 | -0.212 |
| Isoniazid02 | 1.551 | -0.434 |
| Rifampicin4 | 1.649 | 0.796 |
| Ethambutol3 | 2.526 | 3.317 |
| Meropenem3 | 0.32 | -0.152 |
| Vancomycin16 | 0.626 | 0.844 |
| Rv2680_day32 | 1.115 | -1.542 |
| H37Rv_KO_MarP | 0.117 | -0.343 |
| hypoxia_3wks | -1.132 | -6.0 |
| hypoxia_6wks | -0.94 | -6.0 |
| glycerol | -1.207 | -0.932 |
| cholesterol | -1.436 | -1.591 |
| AJ | -1.457 | -1.077 |
| Bibs02 | -0.886 | -1.011 |
| Bibs02c | 0.0 | -0.7 |
| BL6 | 1.422 | -0.022 |
| BL6a | -0.324 | -1.233 |
| BXD01 | -0.292 | -1.445 |
| BXD010 | -1.449 | -0.725 |
| BXD011 | -0.313 | -1.606 |
| BXD03 | -0.046 | -1.013 |
| BXD04 | 0.138 | -1.133 |
| BXD05 | -0.483 | -0.81 |
| BXD06 | 0.108 | -1.349 |
| BXD07 | -0.283 | -1.3 |
| BXD08 | -0.509 | -1.07 |
| BXD09 | -0.538 | -1.449 |
| CAST | -0.938 | -0.506 |
| CCcont | 0.492 | -0.38 |
| DS01 | -0.482 | -0.4 |
| DS02 | 0.521 | 0.331 |
| DS04 | -1.102 | 0.485 |
| DS0c | 0.339 | -0.435 |
| GP01 | -1.694 | -1.571 |
| GP02 | -0.825 | -1.12 |
| GP0c | -1.348 | -0.646 |
| NOD | 0.384 | -0.158 |
| NZO | -2.257 | -1.449 |
| PWK | -0.656 | -0.389 |
| H37Rv_KO_CtpC | 1.511 | 0.224 |
| H37Rv_KO_CtpD | 0.565 | -0.44 |
| H37Rv_KO_Rv1272 | 0.32 | -0.19 |
| H37Rv_KO_SugABC | 0.277 | -0.159 |
| H37Rv_KO_MbtN | -1.022 | -0.108 |
| Trans05 | 0.166 | -1.106 |
| macrophage_unactivated | -0.363 | -0.316 |
| IL1 | -0.169 | -0.908 |
| Rapamycin | 0.166 | -0.954 |
| Tcell | 1.215 | -0.567 |
| GMCSF | -1.196 | -1.413 |
| IFNab | -1.218 | -1.01 |
| IFNg | -2.037 | -2.683 |
| IFNg_GMCSF1 | -2.394 | -2.379 |
| Rv1432_day32 | -1.713 | -1.872 |
| Rv1565c_day32 | 0.03 | -0.291 |
| secA2_input | 0.308 | 1.044 |
| delta_Rv3594 | -0.32 | 0.523 |
| delta_Rv3717 | -1.083 | -0.714 |
| delta_Rv3811 | -0.485 | -0.242 |
| delta_Rv0954 | 0.255 | 0.615 |
| PonA1 | 0.681 | 0.454 |
| EccD1_KO | -0.96 | 0.201 |
| EspI_KO | -0.975 | 0.719 |
| PE35_KO | -0.674 | 0.522 |
| PPE68_KO | -1.014 | 0.512 |
| glycerol2 | -0.146 | 0.5 |
| lignocerate | -0.885 | 0.813 |
| oleate | -0.664 | -0.221 |
| phosphatidylcholine | -0.629 | 0.777 |
| acetate | 0.023 | 0.386 |
| glucAc | -0.347 | 0.584 |
| Rv0950ko | 1.273 | 0.256 |
| Rv1096ko | 0.166 | 0.0 |
| Rv3684ko | 0.092 | 0.269 |
| delta_otsA_trehalose | 0.711 | -0.092 |