Top 10 genes with highest correlation to Rv1474c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2621c/- | (cc=0.4614) | info on Rv2621c/- |
| Rv1069c/- | (cc=0.4602) | info on Rv1069c/- |
| Rv3075c/- | (cc=0.4515) | info on Rv3075c/- |
| Rv2668/- | (cc=0.4503) | info on Rv2668/- |
| Rv3160c/- | (cc=0.4454) | info on Rv3160c/- |
| Rv2141c/- | (cc=0.4311) | info on Rv2141c/- |
| Rv1193/fadD36 | (cc=0.4289) | info on Rv1193/fadD36 |
| Rv2680/- | (cc=0.4203) | info on Rv2680/- |
| Rv3385c/vapB46 | (cc=0.4134) | info on Rv3385c/vapB46 |
| Rv3848/- | (cc=0.4098) | info on Rv3848/- |
Correlation of Rv1474c/- with Rv2621c/-
Normalized LFCs for Rv1474c/-:
(description and provenance of datasets)
| Rv1474c/- | Rv2621c/- | |
| Fe_supp_jason_reseq | -0.617 | -1.151 |
| low_pH_jason_reseq | 0.579 | -0.038 |
| NO_jason_reseq | -2.318 | -2.686 |
| B6_jason_reseq | -0.813 | -0.469 |
| MHCII_jason_reseq | -1.359 | -0.046 |
| Isoniazid02 | 1.551 | 0.918 |
| Rifampicin4 | 1.649 | 0.896 |
| Ethambutol3 | 2.526 | 0.614 |
| Meropenem3 | 0.32 | 0.96 |
| Vancomycin16 | 0.626 | 0.676 |
| Rv2680_day32 | 1.115 | 0.249 |
| H37Rv_KO_MarP | 0.117 | -0.995 |
| hypoxia_3wks | -1.132 | -1.093 |
| hypoxia_6wks | -0.94 | -0.946 |
| glycerol | -1.207 | -0.076 |
| cholesterol | -1.436 | 0.311 |
| AJ | -1.457 | -1.812 |
| Bibs02 | -0.886 | -0.878 |
| Bibs02c | 0.0 | 1.476 |
| BL6 | 1.422 | 0.883 |
| BL6a | -0.324 | 1.036 |
| BXD01 | -0.292 | -0.829 |
| BXD010 | -1.449 | -1.619 |
| BXD011 | -0.313 | -1.152 |
| BXD03 | -0.046 | -0.816 |
| BXD04 | 0.138 | -0.365 |
| BXD05 | -0.483 | -0.686 |
| BXD06 | 0.108 | -1.393 |
| BXD07 | -0.283 | -0.665 |
| BXD08 | -0.509 | -0.21 |
| BXD09 | -0.538 | -1.21 |
| CAST | -0.938 | -1.39 |
| CCcont | 0.492 | 0.892 |
| DS01 | -0.482 | -0.323 |
| DS02 | 0.521 | -1.459 |
| DS04 | -1.102 | -1.671 |
| DS0c | 0.339 | -0.693 |
| GP01 | -1.694 | -1.697 |
| GP02 | -0.825 | -0.789 |
| GP0c | -1.348 | -1.233 |
| NOD | 0.384 | 2.437 |
| NZO | -2.257 | -1.984 |
| PWK | -0.656 | -1.458 |
| H37Rv_KO_CtpC | 1.511 | -0.733 |
| H37Rv_KO_CtpD | 0.565 | 0.153 |
| H37Rv_KO_Rv1272 | 0.32 | 0.706 |
| H37Rv_KO_SugABC | 0.277 | -1.613 |
| H37Rv_KO_MbtN | -1.022 | -1.128 |
| Trans05 | 0.166 | 0.221 |
| macrophage_unactivated | -0.363 | 1.821 |
| IL1 | -0.169 | 0.819 |
| Rapamycin | 0.166 | 0.0 |
| Tcell | 1.215 | 0.241 |
| GMCSF | -1.196 | 1.146 |
| IFNab | -1.218 | -0.484 |
| IFNg | -2.037 | -1.088 |
| IFNg_GMCSF1 | -2.394 | -1.838 |
| Rv1432_day32 | -1.713 | -0.24 |
| Rv1565c_day32 | 0.03 | 0.028 |
| secA2_input | 0.308 | 0.056 |
| delta_Rv3594 | -0.32 | 0.961 |
| delta_Rv3717 | -1.083 | -0.578 |
| delta_Rv3811 | -0.485 | 0.636 |
| delta_Rv0954 | 0.255 | 0.423 |
| PonA1 | 0.681 | 0.516 |
| EccD1_KO | -0.96 | -0.661 |
| EspI_KO | -0.975 | -0.277 |
| PE35_KO | -0.674 | -0.913 |
| PPE68_KO | -1.014 | -1.389 |
| glycerol2 | -0.146 | 1.938 |
| lignocerate | -0.885 | 2.873 |
| oleate | -0.664 | -1.509 |
| phosphatidylcholine | -0.629 | 1.762 |
| acetate | 0.023 | 3.451 |
| glucAc | -0.347 | 2.776 |
| Rv0950ko | 1.273 | 3.13 |
| Rv1096ko | 0.166 | 1.764 |
| Rv3684ko | 0.092 | 0.481 |
| delta_otsA_trehalose | 0.711 | 0.071 |