Top 10 genes with highest correlation to Rv1473/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0806c/cpsY | (cc=0.6954) | info on Rv0806c/cpsY |
| Rv2733c/- | (cc=0.6939) | info on Rv2733c/- |
| Rv2467/pepN | (cc=0.6869) | info on Rv2467/pepN |
| Rv0910/- | (cc=0.642) | info on Rv0910/- |
| Rv2140c/TB18.6 | (cc=0.6317) | info on Rv2140c/TB18.6 |
| Rv0561c/- | (cc=0.6311) | info on Rv0561c/- |
| Rv2125/- | (cc=0.6284) | info on Rv2125/- |
| Rv1287/- | (cc=0.6039) | info on Rv1287/- |
| Rv1824/- | (cc=0.5889) | info on Rv1824/- |
| Rv0038/- | (cc=0.587) | info on Rv0038/- |
Correlation of Rv1473/- with Rv1824/-
Normalized LFCs for Rv1473/-:
(description and provenance of datasets)
| Rv1473/- | Rv1824/- | |
| Fe_supp_jason_reseq | 1.664 | 2.671 |
| low_pH_jason_reseq | 0.179 | 1.377 |
| NO_jason_reseq | 0.281 | 0.788 |
| B6_jason_reseq | -0.421 | 0.607 |
| MHCII_jason_reseq | 1.03 | 1.132 |
| Isoniazid02 | -0.141 | -0.274 |
| Rifampicin4 | 0.141 | -2.185 |
| Ethambutol3 | 0.353 | -1.366 |
| Meropenem3 | 0.545 | -1.095 |
| Vancomycin16 | 0.403 | -3.526 |
| Rv2680_day32 | 1.437 | -0.131 |
| H37Rv_KO_MarP | -0.313 | 6.0 |
| hypoxia_3wks | -1.132 | -2.269 |
| hypoxia_6wks | -2.088 | -2.827 |
| glycerol | 2.61 | 0.341 |
| cholesterol | 0.871 | -1.129 |
| AJ | -1.55 | -2.403 |
| Bibs02 | -0.167 | -1.191 |
| Bibs02c | 0.674 | -0.876 |
| BL6 | -1.06 | -1.45 |
| BL6a | 0.057 | -0.96 |
| BXD01 | -1.386 | -2.453 |
| BXD010 | -1.363 | -2.913 |
| BXD011 | -1.165 | -1.859 |
| BXD03 | -1.553 | -2.84 |
| BXD04 | -1.316 | -2.813 |
| BXD05 | -1.055 | -2.723 |
| BXD06 | -1.221 | -2.803 |
| BXD07 | -1.174 | -2.359 |
| BXD08 | -1.527 | -3.158 |
| BXD09 | -1.286 | -2.394 |
| CAST | -1.952 | -3.924 |
| CCcont | 1.227 | 1.168 |
| DS01 | -0.14 | -2.897 |
| DS02 | -1.226 | -2.521 |
| DS04 | -1.192 | -0.94 |
| DS0c | -0.064 | -0.247 |
| GP01 | 0.811 | -2.073 |
| GP02 | -0.603 | -1.976 |
| GP0c | -0.391 | -2.84 |
| NOD | -1.38 | -3.279 |
| NZO | -1.825 | -2.744 |
| PWK | -2.087 | -3.969 |
| H37Rv_KO_CtpC | -0.835 | -1.026 |
| H37Rv_KO_CtpD | 0.173 | -1.35 |
| H37Rv_KO_Rv1272 | -0.942 | 0.225 |
| H37Rv_KO_SugABC | 1.128 | -2.163 |
| H37Rv_KO_MbtN | 0.086 | -1.756 |
| Trans05 | -0.803 | 0.121 |
| macrophage_unactivated | 0.802 | 0.129 |
| IL1 | -1.344 | -0.519 |
| Rapamycin | -0.175 | 0.7 |
| Tcell | -1.004 | -0.277 |
| GMCSF | -0.15 | -1.769 |
| IFNab | -0.348 | -1.645 |
| IFNg | -1.638 | -1.147 |
| IFNg_GMCSF1 | -0.757 | -2.105 |
| Rv1432_day32 | 0.992 | -2.726 |
| Rv1565c_day32 | 1.515 | 0.49 |
| secA2_input | 1.623 | 1.509 |
| delta_Rv3594 | 2.688 | 1.576 |
| delta_Rv3717 | 0.82 | -0.522 |
| delta_Rv3811 | 2.104 | 0.311 |
| delta_Rv0954 | 1.005 | -0.699 |
| PonA1 | 1.445 | 0.211 |
| EccD1_KO | 0.539 | 0.678 |
| EspI_KO | 1.474 | 0.0 |
| PE35_KO | 1.193 | 2.438 |
| PPE68_KO | 1.6 | 1.801 |
| glycerol2 | -0.615 | -4.161 |
| lignocerate | -0.785 | -1.458 |
| oleate | -1.195 | -5.464 |
| phosphatidylcholine | -0.803 | -0.416 |
| acetate | 0.527 | 0.625 |
| glucAc | 0.707 | 0.656 |
| Rv0950ko | -0.932 | -0.344 |
| Rv1096ko | -1.559 | -3.308 |
| Rv3684ko | -1.228 | -1.159 |
| delta_otsA_trehalose | 1.844 | -0.329 |