Top 10 genes with highest correlation to Rv1473/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0806c/cpsY | (cc=0.6954) | info on Rv0806c/cpsY |
| Rv2733c/- | (cc=0.6939) | info on Rv2733c/- |
| Rv2467/pepN | (cc=0.6869) | info on Rv2467/pepN |
| Rv0910/- | (cc=0.642) | info on Rv0910/- |
| Rv2140c/TB18.6 | (cc=0.6317) | info on Rv2140c/TB18.6 |
| Rv0561c/- | (cc=0.6311) | info on Rv0561c/- |
| Rv2125/- | (cc=0.6284) | info on Rv2125/- |
| Rv1287/- | (cc=0.6039) | info on Rv1287/- |
| Rv1824/- | (cc=0.5889) | info on Rv1824/- |
| Rv0038/- | (cc=0.587) | info on Rv0038/- |
Correlation of Rv1473/- with Rv0561c/-
Normalized LFCs for Rv1473/-:
(description and provenance of datasets)
| Rv1473/- | Rv0561c/- | |
| Fe_supp_jason_reseq | 1.664 | 2.559 |
| low_pH_jason_reseq | 0.179 | 0.0 |
| NO_jason_reseq | 0.281 | -0.995 |
| B6_jason_reseq | -0.421 | -0.421 |
| MHCII_jason_reseq | 1.03 | 0.742 |
| Isoniazid02 | -0.141 | -0.045 |
| Rifampicin4 | 0.141 | -1.887 |
| Ethambutol3 | 0.353 | -0.517 |
| Meropenem3 | 0.545 | -0.895 |
| Vancomycin16 | 0.403 | -1.021 |
| Rv2680_day32 | 1.437 | -0.554 |
| H37Rv_KO_MarP | -0.313 | -0.838 |
| hypoxia_3wks | -1.132 | -1.543 |
| hypoxia_6wks | -2.088 | -1.599 |
| glycerol | 2.61 | 2.098 |
| cholesterol | 0.871 | 1.736 |
| AJ | -1.55 | -1.531 |
| Bibs02 | -0.167 | -0.563 |
| Bibs02c | 0.674 | -0.353 |
| BL6 | -1.06 | -2.023 |
| BL6a | 0.057 | -1.148 |
| BXD01 | -1.386 | -2.107 |
| BXD010 | -1.363 | -2.072 |
| BXD011 | -1.165 | -1.711 |
| BXD03 | -1.553 | -2.187 |
| BXD04 | -1.316 | -1.877 |
| BXD05 | -1.055 | -2.042 |
| BXD06 | -1.221 | -2.159 |
| BXD07 | -1.174 | -2.101 |
| BXD08 | -1.527 | -2.151 |
| BXD09 | -1.286 | -2.273 |
| CAST | -1.952 | -2.181 |
| CCcont | 1.227 | -0.552 |
| DS01 | -0.14 | 1.685 |
| DS02 | -1.226 | -0.544 |
| DS04 | -1.192 | -0.911 |
| DS0c | -0.064 | 1.37 |
| GP01 | 0.811 | -1.409 |
| GP02 | -0.603 | -1.263 |
| GP0c | -0.391 | -2.103 |
| NOD | -1.38 | -0.903 |
| NZO | -1.825 | -2.381 |
| PWK | -2.087 | -1.137 |
| H37Rv_KO_CtpC | -0.835 | -0.941 |
| H37Rv_KO_CtpD | 0.173 | -1.603 |
| H37Rv_KO_Rv1272 | -0.942 | -0.872 |
| H37Rv_KO_SugABC | 1.128 | -1.414 |
| H37Rv_KO_MbtN | 0.086 | -1.471 |
| Trans05 | -0.803 | -1.983 |
| macrophage_unactivated | 0.802 | -0.316 |
| IL1 | -1.344 | -1.735 |
| Rapamycin | -0.175 | -1.795 |
| Tcell | -1.004 | -0.671 |
| GMCSF | -0.15 | -1.18 |
| IFNab | -0.348 | -0.623 |
| IFNg | -1.638 | -1.195 |
| IFNg_GMCSF1 | -0.757 | -0.314 |
| Rv1432_day32 | 0.992 | -0.632 |
| Rv1565c_day32 | 1.515 | 0.0 |
| secA2_input | 1.623 | 0.676 |
| delta_Rv3594 | 2.688 | -0.684 |
| delta_Rv3717 | 0.82 | -0.736 |
| delta_Rv3811 | 2.104 | -0.665 |
| delta_Rv0954 | 1.005 | 2.95 |
| PonA1 | 1.445 | 2.163 |
| EccD1_KO | 0.539 | -0.26 |
| EspI_KO | 1.474 | 0.739 |
| PE35_KO | 1.193 | 0.496 |
| PPE68_KO | 1.6 | 0.394 |
| glycerol2 | -0.615 | -1.366 |
| lignocerate | -0.785 | -0.759 |
| oleate | -1.195 | -3.187 |
| phosphatidylcholine | -0.803 | -0.036 |
| acetate | 0.527 | 1.25 |
| glucAc | 0.707 | 0.853 |
| Rv0950ko | -0.932 | -0.989 |
| Rv1096ko | -1.559 | -0.549 |
| Rv3684ko | -1.228 | -0.596 |
| delta_otsA_trehalose | 1.844 | -0.234 |