Top 10 genes with highest correlation to Rv1473/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0806c/cpsY | (cc=0.6954) | info on Rv0806c/cpsY |
| Rv2733c/- | (cc=0.6939) | info on Rv2733c/- |
| Rv2467/pepN | (cc=0.6869) | info on Rv2467/pepN |
| Rv0910/- | (cc=0.642) | info on Rv0910/- |
| Rv2140c/TB18.6 | (cc=0.6317) | info on Rv2140c/TB18.6 |
| Rv0561c/- | (cc=0.6311) | info on Rv0561c/- |
| Rv2125/- | (cc=0.6284) | info on Rv2125/- |
| Rv1287/- | (cc=0.6039) | info on Rv1287/- |
| Rv1824/- | (cc=0.5889) | info on Rv1824/- |
| Rv0038/- | (cc=0.587) | info on Rv0038/- |
Correlation of Rv1473/- with Rv0806c/cpsY
Normalized LFCs for Rv1473/-:
(description and provenance of datasets)
| Rv1473/- | Rv0806c/cpsY | |
| Fe_supp_jason_reseq | 1.664 | -1.05 |
| low_pH_jason_reseq | 0.179 | -2.12 |
| NO_jason_reseq | 0.281 | -0.431 |
| B6_jason_reseq | -0.421 | -2.577 |
| MHCII_jason_reseq | 1.03 | -0.044 |
| Isoniazid02 | -0.141 | -1.614 |
| Rifampicin4 | 0.141 | -1.132 |
| Ethambutol3 | 0.353 | 1.245 |
| Meropenem3 | 0.545 | 0.477 |
| Vancomycin16 | 0.403 | -1.143 |
| Rv2680_day32 | 1.437 | -0.169 |
| H37Rv_KO_MarP | -0.313 | -0.474 |
| hypoxia_3wks | -1.132 | 0.239 |
| hypoxia_6wks | -2.088 | -1.729 |
| glycerol | 2.61 | 1.496 |
| cholesterol | 0.871 | -0.246 |
| AJ | -1.55 | -2.165 |
| Bibs02 | -0.167 | -0.658 |
| Bibs02c | 0.674 | 0.15 |
| BL6 | -1.06 | -2.417 |
| BL6a | 0.057 | -1.263 |
| BXD01 | -1.386 | -3.001 |
| BXD010 | -1.363 | -1.932 |
| BXD011 | -1.165 | -1.214 |
| BXD03 | -1.553 | -2.761 |
| BXD04 | -1.316 | -2.455 |
| BXD05 | -1.055 | -2.286 |
| BXD06 | -1.221 | -1.967 |
| BXD07 | -1.174 | -2.088 |
| BXD08 | -1.527 | -2.006 |
| BXD09 | -1.286 | -2.575 |
| CAST | -1.952 | -4.219 |
| CCcont | 1.227 | 0.037 |
| DS01 | -0.14 | -2.402 |
| DS02 | -1.226 | -3.605 |
| DS04 | -1.192 | -1.772 |
| DS0c | -0.064 | -1.255 |
| GP01 | 0.811 | -0.477 |
| GP02 | -0.603 | -1.699 |
| GP0c | -0.391 | -1.961 |
| NOD | -1.38 | -1.432 |
| NZO | -1.825 | -2.117 |
| PWK | -2.087 | -3.332 |
| H37Rv_KO_CtpC | -0.835 | -0.661 |
| H37Rv_KO_CtpD | 0.173 | -2.206 |
| H37Rv_KO_Rv1272 | -0.942 | -0.121 |
| H37Rv_KO_SugABC | 1.128 | 1.11 |
| H37Rv_KO_MbtN | 0.086 | 0.768 |
| Trans05 | -0.803 | -1.578 |
| macrophage_unactivated | 0.802 | 1.562 |
| IL1 | -1.344 | -0.32 |
| Rapamycin | -0.175 | 0.457 |
| Tcell | -1.004 | 1.45 |
| GMCSF | -0.15 | -0.187 |
| IFNab | -0.348 | -0.327 |
| IFNg | -1.638 | -0.39 |
| IFNg_GMCSF1 | -0.757 | -1.109 |
| Rv1432_day32 | 0.992 | 1.083 |
| Rv1565c_day32 | 1.515 | 0.087 |
| secA2_input | 1.623 | -0.105 |
| delta_Rv3594 | 2.688 | 3.879 |
| delta_Rv3717 | 0.82 | 4.198 |
| delta_Rv3811 | 2.104 | 2.208 |
| delta_Rv0954 | 1.005 | 3.34 |
| PonA1 | 1.445 | 0.0 |
| EccD1_KO | 0.539 | 1.822 |
| EspI_KO | 1.474 | 1.851 |
| PE35_KO | 1.193 | 0.601 |
| PPE68_KO | 1.6 | 1.913 |
| glycerol2 | -0.615 | -1.283 |
| lignocerate | -0.785 | -2.512 |
| oleate | -1.195 | -2.44 |
| phosphatidylcholine | -0.803 | -2.683 |
| acetate | 0.527 | 0.15 |
| glucAc | 0.707 | -0.272 |
| Rv0950ko | -0.932 | -0.051 |
| Rv1096ko | -1.559 | -0.576 |
| Rv3684ko | -1.228 | -0.468 |
| delta_otsA_trehalose | 1.844 | -0.149 |