Top 10 genes with highest correlation to Rv1469/ctpD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0209/- | (cc=0.4705) | info on Rv0209/- |
| Rv1045/- | (cc=0.4476) | info on Rv1045/- |
| Rv2789c/fadE21 | (cc=0.4457) | info on Rv2789c/fadE21 |
| Rv3386/- | (cc=0.4363) | info on Rv3386/- |
| Rv1755c/plcD | (cc=0.4209) | info on Rv1755c/plcD |
| Rv1954c/- | (cc=0.4206) | info on Rv1954c/- |
| Rv2617c/- | (cc=0.4184) | info on Rv2617c/- |
| Rv2481c/- | (cc=0.409) | info on Rv2481c/- |
| Rv1038c/esxJ | (cc=0.4049) | info on Rv1038c/esxJ |
| Rv2587c/secD | (cc=0.4042) | info on Rv2587c/secD |
Correlation of Rv1469/ctpD with Rv3386/-
Normalized LFCs for Rv1469/ctpD:
(description and provenance of datasets)
| Rv1469/ctpD | Rv3386/- | |
| Fe_supp_jason_reseq | 0.152 | 1.113 |
| low_pH_jason_reseq | -1.591 | -1.218 |
| NO_jason_reseq | 0.252 | -0.711 |
| B6_jason_reseq | -0.259 | -0.029 |
| MHCII_jason_reseq | -0.547 | -0.176 |
| Isoniazid02 | 0.422 | -0.487 |
| Rifampicin4 | 0.032 | 0.91 |
| Ethambutol3 | 0.388 | 0.12 |
| Meropenem3 | -0.155 | -0.243 |
| Vancomycin16 | 0.191 | 0.058 |
| Rv2680_day32 | 0.284 | -1.645 |
| H37Rv_KO_MarP | -0.038 | 0.066 |
| hypoxia_3wks | -0.191 | -0.219 |
| hypoxia_6wks | 0.033 | -0.038 |
| glycerol | 0.246 | -0.781 |
| cholesterol | -0.452 | -0.397 |
| AJ | -0.617 | -0.2 |
| Bibs02 | -0.11 | -0.013 |
| Bibs02c | -0.153 | -0.767 |
| BL6 | 0.085 | -0.225 |
| BL6a | -0.527 | -0.489 |
| BXD01 | 0.075 | 0.245 |
| BXD010 | -0.061 | -0.159 |
| BXD011 | -0.547 | -0.383 |
| BXD03 | 0.273 | 0.444 |
| BXD04 | -0.488 | -0.284 |
| BXD05 | -0.259 | 0.246 |
| BXD06 | 0.031 | -0.307 |
| BXD07 | -0.229 | 0.353 |
| BXD08 | 0.105 | 0.618 |
| BXD09 | -0.374 | -0.01 |
| CAST | 0.42 | 0.889 |
| CCcont | 0.243 | 0.07 |
| DS01 | -0.358 | -0.96 |
| DS02 | 0.354 | -1.092 |
| DS04 | -1.522 | -0.583 |
| DS0c | -0.481 | -0.594 |
| GP01 | 0.988 | 0.278 |
| GP02 | 0.863 | 1.177 |
| GP0c | 0.625 | 0.078 |
| NOD | 0.721 | 0.714 |
| NZO | -1.12 | 0.081 |
| PWK | -0.27 | 0.347 |
| H37Rv_KO_CtpC | 0.198 | -0.401 |
| H37Rv_KO_CtpD | -0.818 | -0.541 |
| H37Rv_KO_Rv1272 | -0.085 | -0.039 |
| H37Rv_KO_SugABC | -1.655 | -1.613 |
| H37Rv_KO_MbtN | -0.538 | -0.495 |
| Trans05 | 0.374 | 0.185 |
| macrophage_unactivated | 0.177 | -0.028 |
| IL1 | -0.353 | 0.08 |
| Rapamycin | 0.172 | -0.506 |
| Tcell | -0.254 | -0.886 |
| GMCSF | -0.776 | -1.024 |
| IFNab | 0.0 | -0.469 |
| IFNg | -0.371 | -0.756 |
| IFNg_GMCSF1 | 0.06 | -0.361 |
| Rv1432_day32 | 0.455 | 1.112 |
| Rv1565c_day32 | 0.096 | 1.042 |
| secA2_input | -1.606 | -0.604 |
| delta_Rv3594 | -0.384 | -1.241 |
| delta_Rv3717 | -0.459 | -0.745 |
| delta_Rv3811 | -0.094 | -0.973 |
| delta_Rv0954 | -0.472 | -1.31 |
| PonA1 | 0.379 | -1.301 |
| EccD1_KO | -0.145 | 0.076 |
| EspI_KO | -0.676 | -0.328 |
| PE35_KO | -0.128 | -0.023 |
| PPE68_KO | -0.493 | -0.259 |
| glycerol2 | 0.46 | 0.283 |
| lignocerate | 0.57 | 0.678 |
| oleate | 0.064 | -0.136 |
| phosphatidylcholine | 0.608 | -0.104 |
| acetate | 0.399 | 0.133 |
| glucAc | 1.17 | 0.281 |
| Rv0950ko | 0.093 | 0.329 |
| Rv1096ko | 0.142 | -0.953 |
| Rv3684ko | 1.461 | -0.19 |
| delta_otsA_trehalose | -0.724 | -0.016 |