Top 10 genes with highest correlation to Rv1469/ctpD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0209/- | (cc=0.4705) | info on Rv0209/- |
| Rv1045/- | (cc=0.4476) | info on Rv1045/- |
| Rv2789c/fadE21 | (cc=0.4457) | info on Rv2789c/fadE21 |
| Rv3386/- | (cc=0.4363) | info on Rv3386/- |
| Rv1755c/plcD | (cc=0.4209) | info on Rv1755c/plcD |
| Rv1954c/- | (cc=0.4206) | info on Rv1954c/- |
| Rv2617c/- | (cc=0.4184) | info on Rv2617c/- |
| Rv2481c/- | (cc=0.409) | info on Rv2481c/- |
| Rv1038c/esxJ | (cc=0.4049) | info on Rv1038c/esxJ |
| Rv2587c/secD | (cc=0.4042) | info on Rv2587c/secD |
Correlation of Rv1469/ctpD with Rv1954c/-
Normalized LFCs for Rv1469/ctpD:
(description and provenance of datasets)
| Rv1469/ctpD | Rv1954c/- | |
| Fe_supp_jason_reseq | 0.152 | -0.147 |
| low_pH_jason_reseq | -1.591 | -0.927 |
| NO_jason_reseq | 0.252 | 0.656 |
| B6_jason_reseq | -0.259 | -0.253 |
| MHCII_jason_reseq | -0.547 | -0.123 |
| Isoniazid02 | 0.422 | -0.595 |
| Rifampicin4 | 0.032 | -0.122 |
| Ethambutol3 | 0.388 | 2.064 |
| Meropenem3 | -0.155 | -0.437 |
| Vancomycin16 | 0.191 | -0.663 |
| Rv2680_day32 | 0.284 | 0.686 |
| H37Rv_KO_MarP | -0.038 | 0.202 |
| hypoxia_3wks | -0.191 | -0.873 |
| hypoxia_6wks | 0.033 | -0.482 |
| glycerol | 0.246 | -0.36 |
| cholesterol | -0.452 | -0.96 |
| AJ | -0.617 | -0.432 |
| Bibs02 | -0.11 | -0.34 |
| Bibs02c | -0.153 | -0.655 |
| BL6 | 0.085 | 0.99 |
| BL6a | -0.527 | -0.129 |
| BXD01 | 0.075 | -0.306 |
| BXD010 | -0.061 | 0.224 |
| BXD011 | -0.547 | 0.237 |
| BXD03 | 0.273 | 0.336 |
| BXD04 | -0.488 | -0.081 |
| BXD05 | -0.259 | 0.604 |
| BXD06 | 0.031 | 0.249 |
| BXD07 | -0.229 | 0.269 |
| BXD08 | 0.105 | 0.183 |
| BXD09 | -0.374 | 0.206 |
| CAST | 0.42 | -0.609 |
| CCcont | 0.243 | -0.529 |
| DS01 | -0.358 | -0.197 |
| DS02 | 0.354 | -0.457 |
| DS04 | -1.522 | 0.25 |
| DS0c | -0.481 | -0.236 |
| GP01 | 0.988 | -0.014 |
| GP02 | 0.863 | 0.731 |
| GP0c | 0.625 | 0.152 |
| NOD | 0.721 | 1.053 |
| NZO | -1.12 | -0.598 |
| PWK | -0.27 | -0.649 |
| H37Rv_KO_CtpC | 0.198 | -0.177 |
| H37Rv_KO_CtpD | -0.818 | -0.682 |
| H37Rv_KO_Rv1272 | -0.085 | 1.088 |
| H37Rv_KO_SugABC | -1.655 | -1.919 |
| H37Rv_KO_MbtN | -0.538 | -1.354 |
| Trans05 | 0.374 | 0.499 |
| macrophage_unactivated | 0.177 | 0.641 |
| IL1 | -0.353 | -0.104 |
| Rapamycin | 0.172 | 0.092 |
| Tcell | -0.254 | -0.16 |
| GMCSF | -0.776 | -0.129 |
| IFNab | 0.0 | 0.257 |
| IFNg | -0.371 | -0.069 |
| IFNg_GMCSF1 | 0.06 | 0.481 |
| Rv1432_day32 | 0.455 | 0.45 |
| Rv1565c_day32 | 0.096 | 0.191 |
| secA2_input | -1.606 | -0.792 |
| delta_Rv3594 | -0.384 | 0.187 |
| delta_Rv3717 | -0.459 | 0.264 |
| delta_Rv3811 | -0.094 | -0.091 |
| delta_Rv0954 | -0.472 | -0.084 |
| PonA1 | 0.379 | -0.494 |
| EccD1_KO | -0.145 | 0.155 |
| EspI_KO | -0.676 | 0.388 |
| PE35_KO | -0.128 | -0.041 |
| PPE68_KO | -0.493 | 0.09 |
| glycerol2 | 0.46 | 0.364 |
| lignocerate | 0.57 | 0.416 |
| oleate | 0.064 | 0.279 |
| phosphatidylcholine | 0.608 | 0.343 |
| acetate | 0.399 | -0.047 |
| glucAc | 1.17 | 0.434 |
| Rv0950ko | 0.093 | 0.0 |
| Rv1096ko | 0.142 | -0.256 |
| Rv3684ko | 1.461 | -0.576 |
| delta_otsA_trehalose | -0.724 | -0.934 |