Top 10 genes with highest correlation to Rv1455/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2474c/- | (cc=0.5194) | info on Rv2474c/- |
| Rv3353c/- | (cc=0.5126) | info on Rv3353c/- |
| Rv0264c/- | (cc=0.5089) | info on Rv0264c/- |
| Rv3058c/- | (cc=0.4882) | info on Rv3058c/- |
| Rv3059/cyp136 | (cc=0.4644) | info on Rv3059/cyp136 |
| Rv2638/- | (cc=0.4625) | info on Rv2638/- |
| Rv0278c/PE_PGRS3 | (cc=0.4496) | info on Rv0278c/PE_PGRS3 |
| Rv3287c/rsbW | (cc=0.4444) | info on Rv3287c/rsbW |
| Rv3469c/mhpE | (cc=0.4422) | info on Rv3469c/mhpE |
| Rv0964c/- | (cc=0.4409) | info on Rv0964c/- |
Correlation of Rv1455/- with Rv2474c/-
Normalized LFCs for Rv1455/-:
(description and provenance of datasets)
| Rv1455/- | Rv2474c/- | |
| Fe_supp_jason_reseq | 0.033 | -1.07 |
| low_pH_jason_reseq | -0.417 | 1.491 |
| NO_jason_reseq | -1.743 | -4.949 |
| B6_jason_reseq | 0.179 | -2.511 |
| MHCII_jason_reseq | -0.177 | -1.549 |
| Isoniazid02 | 0.214 | 2.023 |
| Rifampicin4 | 0.382 | 0.133 |
| Ethambutol3 | -0.62 | -0.062 |
| Meropenem3 | 1.03 | -0.558 |
| Vancomycin16 | 0.44 | 0.608 |
| Rv2680_day32 | -0.641 | -2.225 |
| H37Rv_KO_MarP | 0.432 | -0.34 |
| hypoxia_3wks | 1.284 | -0.411 |
| hypoxia_6wks | 1.754 | 0.814 |
| glycerol | 0.882 | -0.186 |
| cholesterol | 0.052 | -0.359 |
| AJ | 0.573 | -3.466 |
| Bibs02 | -0.868 | -1.298 |
| Bibs02c | 0.053 | -3.259 |
| BL6 | 1.107 | -2.563 |
| BL6a | -0.059 | -3.514 |
| BXD01 | -0.184 | -2.668 |
| BXD010 | -0.043 | -2.624 |
| BXD011 | -0.143 | -2.609 |
| BXD03 | 0.342 | -2.77 |
| BXD04 | 0.479 | -2.533 |
| BXD05 | -0.563 | -2.757 |
| BXD06 | -0.015 | -2.601 |
| BXD07 | -0.462 | -2.837 |
| BXD08 | -0.227 | -2.725 |
| BXD09 | -0.228 | -2.879 |
| CAST | 0.846 | -2.074 |
| CCcont | 0.502 | -1.017 |
| DS01 | -0.115 | -3.006 |
| DS02 | -0.641 | -1.884 |
| DS04 | 0.707 | -2.469 |
| DS0c | -0.409 | -0.706 |
| GP01 | 0.039 | -2.023 |
| GP02 | 1.113 | -1.705 |
| GP0c | 0.26 | -2.664 |
| NOD | 0.669 | -1.289 |
| NZO | 0.043 | -3.241 |
| PWK | 0.307 | -1.177 |
| H37Rv_KO_CtpC | 0.126 | -2.53 |
| H37Rv_KO_CtpD | 0.137 | -0.863 |
| H37Rv_KO_Rv1272 | -0.042 | -2.62 |
| H37Rv_KO_SugABC | -0.044 | -1.757 |
| H37Rv_KO_MbtN | -0.588 | -1.749 |
| Trans05 | 0.529 | -1.952 |
| macrophage_unactivated | -0.881 | -4.744 |
| IL1 | -0.27 | -4.458 |
| Rapamycin | -0.298 | -4.612 |
| Tcell | -0.655 | -3.848 |
| GMCSF | -0.304 | -3.662 |
| IFNab | -0.206 | -4.193 |
| IFNg | -1.042 | -4.017 |
| IFNg_GMCSF1 | -0.669 | -4.723 |
| Rv1432_day32 | -0.408 | 0.0 |
| Rv1565c_day32 | -0.616 | -1.703 |
| secA2_input | -1.19 | -0.348 |
| delta_Rv3594 | -0.217 | 0.428 |
| delta_Rv3717 | -0.376 | -0.438 |
| delta_Rv3811 | 0.021 | -0.518 |
| delta_Rv0954 | -0.025 | 1.91 |
| PonA1 | 0.651 | 2.086 |
| EccD1_KO | 0.46 | -0.296 |
| EspI_KO | 0.445 | 0.582 |
| PE35_KO | 0.852 | 1.397 |
| PPE68_KO | 0.355 | 1.43 |
| glycerol2 | 2.818 | 1.794 |
| lignocerate | 1.143 | 1.845 |
| oleate | 0.661 | 0.625 |
| phosphatidylcholine | 1.654 | 1.541 |
| acetate | 1.109 | 1.983 |
| glucAc | 0.737 | 1.806 |
| Rv0950ko | 0.567 | -0.691 |
| Rv1096ko | 0.452 | -1.004 |
| Rv3684ko | 0.259 | 1.11 |
| delta_otsA_trehalose | 0.131 | 0.0 |