Top 10 genes with highest correlation to Rv1445c/devB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0998/- | (cc=0.5231) | info on Rv0998/- |
| Rv2470/glbO | (cc=0.4825) | info on Rv2470/glbO |
| Rv3680/- | (cc=0.4788) | info on Rv3680/- |
| Rv1473/- | (cc=0.4776) | info on Rv1473/- |
| Rv2344c/dgt | (cc=0.472) | info on Rv2344c/dgt |
| Rv1963c/mce3R | (cc=0.4685) | info on Rv1963c/mce3R |
| Rv0038/- | (cc=0.4631) | info on Rv0038/- |
| Rv3754/tyrA | (cc=0.462) | info on Rv3754/tyrA |
| Rv1114/vapC32 | (cc=0.4428) | info on Rv1114/vapC32 |
| Rv1432/- | (cc=0.4421) | info on Rv1432/- |
Correlation of Rv1445c/devB with Rv0998/-
Normalized LFCs for Rv1445c/devB:
(description and provenance of datasets)
| Rv1445c/devB | Rv0998/- | |
| Fe_supp_jason_reseq | 3.487 | 3.157 |
| low_pH_jason_reseq | 0.539 | 0.231 |
| NO_jason_reseq | -1.089 | 0.0 |
| B6_jason_reseq | -0.461 | 0.153 |
| MHCII_jason_reseq | -0.663 | 0.0 |
| Isoniazid02 | 0.422 | -1.641 |
| Rifampicin4 | 0.412 | -0.68 |
| Ethambutol3 | -0.1 | 0.541 |
| Meropenem3 | 6.0 | 1.265 |
| Vancomycin16 | -0.218 | -0.889 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | -0.556 | -1.233 |
| hypoxia_3wks | -0.706 | 4.103 |
| hypoxia_6wks | 0.33 | -2.211 |
| glycerol | 1.403 | 4.299 |
| cholesterol | 0.435 | 2.403 |
| AJ | 0.797 | -1.425 |
| Bibs02 | 1.751 | 1.216 |
| Bibs02c | -0.399 | 2.004 |
| BL6 | -0.768 | -0.768 |
| BL6a | 0.0 | 0.762 |
| BXD01 | -0.552 | -0.8 |
| BXD010 | -0.787 | -0.787 |
| BXD011 | 1.581 | -0.655 |
| BXD03 | 0.076 | -0.831 |
| BXD04 | -0.42 | -0.76 |
| BXD05 | 2.855 | -0.457 |
| BXD06 | -0.254 | -0.82 |
| BXD07 | 0.475 | -0.851 |
| BXD08 | -0.079 | -0.817 |
| BXD09 | 0.75 | -0.863 |
| CAST | -1.185 | -0.782 |
| CCcont | 2.119 | 2.422 |
| DS01 | 0.133 | 2.421 |
| DS02 | -1.119 | 0.0 |
| DS04 | -1.192 | 1.903 |
| DS0c | 2.875 | 2.176 |
| GP01 | 0.492 | -0.607 |
| GP02 | -0.283 | -0.511 |
| GP0c | -0.669 | -0.799 |
| NOD | 0.0 | -0.591 |
| NZO | 0.113 | -1.225 |
| PWK | 0.0 | -1.205 |
| H37Rv_KO_CtpC | -0.835 | -0.552 |
| H37Rv_KO_CtpD | -0.241 | -0.43 |
| H37Rv_KO_Rv1272 | -0.598 | -0.725 |
| H37Rv_KO_SugABC | -0.26 | 0.254 |
| H37Rv_KO_MbtN | -0.35 | -0.127 |
| Trans05 | -0.161 | -0.672 |
| macrophage_unactivated | -2.273 | -0.884 |
| IL1 | -1.231 | -1.863 |
| Rapamycin | -0.328 | -1.927 |
| Tcell | -0.925 | -0.912 |
| GMCSF | -1.096 | -2.022 |
| IFNab | 1.215 | -0.547 |
| IFNg | -0.593 | -1.678 |
| IFNg_GMCSF1 | -1.756 | -2.407 |
| Rv1432_day32 | 0.727 | -0.343 |
| Rv1565c_day32 | 0.0 | 1.071 |
| secA2_input | -0.775 | 0.302 |
| delta_Rv3594 | 3.284 | 4.054 |
| delta_Rv3717 | 2.731 | 4.344 |
| delta_Rv3811 | 3.123 | 3.679 |
| delta_Rv0954 | 2.176 | 2.505 |
| PonA1 | 1.981 | 2.734 |
| EccD1_KO | 2.263 | -3.588 |
| EspI_KO | 0.328 | -1.711 |
| PE35_KO | 1.383 | -1.928 |
| PPE68_KO | 2.937 | -2.473 |
| glycerol2 | -1.607 | -4.482 |
| lignocerate | -1.667 | -4.062 |
| oleate | -2.12 | -4.73 |
| phosphatidylcholine | -2.286 | -4.143 |
| acetate | 1.24 | -0.023 |
| glucAc | 1.081 | 0.043 |
| Rv0950ko | -0.528 | -3.435 |
| Rv1096ko | -0.817 | -2.781 |
| Rv3684ko | -1.985 | -2.967 |
| delta_otsA_trehalose | 0.61 | -0.788 |