Top 10 genes with highest correlation to Rv1444c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0351/grpE | (cc=0.4399) | info on Rv0351/grpE |
| Rv2857c/- | (cc=0.3761) | info on Rv2857c/- |
| Rv0582/vapC26 | (cc=0.372) | info on Rv0582/vapC26 |
| Rv3636/- | (cc=0.3628) | info on Rv3636/- |
| Rv2263/- | (cc=0.3489) | info on Rv2263/- |
| Rv1128c/- | (cc=0.3472) | info on Rv1128c/- |
| Rv1564c/treX | (cc=0.3433) | info on Rv1564c/treX |
| Rv2579/dhaA | (cc=0.3415) | info on Rv2579/dhaA |
| Rv2882c/frr | (cc=0.3337) | info on Rv2882c/frr |
| Rv1847/- | (cc=0.3241) | info on Rv1847/- |
Correlation of Rv1444c/- with Rv0351/grpE
Normalized LFCs for Rv1444c/-:
(description and provenance of datasets)
| Rv1444c/- | Rv0351/grpE | |
| Fe_supp_jason_reseq | 0.232 | 0.863 |
| low_pH_jason_reseq | 0.246 | 1.27 |
| NO_jason_reseq | 1.796 | 1.016 |
| B6_jason_reseq | 0.895 | -0.421 |
| MHCII_jason_reseq | -0.406 | -0.37 |
| Isoniazid02 | -0.028 | -0.541 |
| Rifampicin4 | -0.374 | -0.574 |
| Ethambutol3 | -0.353 | 0.293 |
| Meropenem3 | 0.381 | -0.254 |
| Vancomycin16 | -0.204 | 0.0 |
| Rv2680_day32 | 0.131 | 0.0 |
| H37Rv_KO_MarP | 1.051 | 1.411 |
| hypoxia_3wks | 2.305 | 0.821 |
| hypoxia_6wks | 0.597 | -0.791 |
| glycerol | -1.731 | 0.0 |
| cholesterol | -0.847 | 0.0 |
| AJ | 0.866 | 0.0 |
| Bibs02 | -3.566 | 0.0 |
| Bibs02c | -0.809 | 0.0 |
| BL6 | 0.571 | 0.0 |
| BL6a | -1.812 | 0.0 |
| BXD01 | -1.649 | 0.248 |
| BXD010 | -0.642 | 0.0 |
| BXD011 | -0.861 | 0.0 |
| BXD03 | -0.624 | 1.553 |
| BXD04 | -0.457 | 0.607 |
| BXD05 | -1.272 | 0.135 |
| BXD06 | -1.221 | 0.133 |
| BXD07 | -0.327 | 0.486 |
| BXD08 | 0.449 | 0.253 |
| BXD09 | -0.109 | 0.0 |
| CAST | -0.509 | 0.23 |
| CCcont | -0.873 | 0.0 |
| DS01 | 0.305 | 0.236 |
| DS02 | -2.056 | 0.0 |
| DS04 | 0.354 | 0.0 |
| DS0c | 0.809 | 0.0 |
| GP01 | 1.461 | 0.986 |
| GP02 | -0.812 | 0.0 |
| GP0c | 0.29 | 0.0 |
| NOD | -0.789 | 0.617 |
| NZO | 0.6 | 0.0 |
| PWK | 3.116 | 0.0 |
| H37Rv_KO_CtpC | 0.867 | 1.808 |
| H37Rv_KO_CtpD | -1.121 | 0.0 |
| H37Rv_KO_Rv1272 | -0.678 | 0.0 |
| H37Rv_KO_SugABC | -1.435 | 0.0 |
| H37Rv_KO_MbtN | 2.15 | 0.0 |
| Trans05 | 1.434 | 0.0 |
| macrophage_unactivated | -0.679 | 0.65 |
| IL1 | 1.622 | 0.89 |
| Rapamycin | 2.124 | 0.632 |
| Tcell | 0.795 | 1.261 |
| GMCSF | 0.335 | 0.792 |
| IFNab | 2.564 | 0.0 |
| IFNg | 1.66 | -0.307 |
| IFNg_GMCSF1 | 1.163 | 1.474 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -2.802 | 0.0 |
| secA2_input | -4.02 | -0.412 |
| delta_Rv3594 | -1.239 | -1.008 |
| delta_Rv3717 | -0.209 | -1.258 |
| delta_Rv3811 | -1.658 | -2.357 |
| delta_Rv0954 | -1.844 | -0.665 |
| PonA1 | -1.483 | -1.829 |
| EccD1_KO | -3.289 | -0.921 |
| EspI_KO | -1.917 | -1.435 |
| PE35_KO | -0.817 | -1.129 |
| PPE68_KO | -0.426 | 0.262 |
| glycerol2 | -0.517 | 0.527 |
| lignocerate | -0.891 | -0.835 |
| oleate | 1.282 | -0.973 |
| phosphatidylcholine | -0.23 | 0.527 |
| acetate | -1.217 | -1.037 |
| glucAc | -2.368 | -1.952 |
| Rv0950ko | 0.817 | 0.0 |
| Rv1096ko | 2.413 | 1.764 |
| Rv3684ko | -0.992 | -0.305 |
| delta_otsA_trehalose | -0.15 | 0.0 |