Top 10 genes with highest correlation to Rv1424c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2083/- | (cc=0.5161) | info on Rv2083/- |
Rv0011c/- | (cc=0.5133) | info on Rv0011c/- |
Rv2136c/- | (cc=0.5107) | info on Rv2136c/- |
Rv3475/- | (cc=0.4888) | info on Rv3475/- |
Rv3022A/PE29 | (cc=0.4808) | info on Rv3022A/PE29 |
Rv2355/- | (cc=0.4798) | info on Rv2355/- |
Rv2270/lppN | (cc=0.4734) | info on Rv2270/lppN |
Rv1554/frdC | (cc=0.4731) | info on Rv1554/frdC |
Rv1984c/cfp21 | (cc=0.4666) | info on Rv1984c/cfp21 |
Rv2649/- | (cc=0.4647) | info on Rv2649/- |
Correlation of Rv1424c/- with Rv2270/lppN
Normalized LFCs for Rv1424c/-:
(description and provenance of datasets)
Rv1424c/- | Rv2270/lppN | |
Fe_supp_jason_reseq | 0.554 | 0.71 |
low_pH_jason_reseq | 0.035 | -0.323 |
NO_jason_reseq | 0.108 | -0.318 |
B6_jason_reseq | 0.256 | 0.63 |
MHCII_jason_reseq | 0.154 | -0.077 |
Isoniazid02 | 0.226 | -0.26 |
Rifampicin4 | 0.726 | 0.401 |
Ethambutol3 | 0.039 | -0.185 |
Meropenem3 | 0.255 | 0.398 |
Vancomycin16 | 0.602 | 0.096 |
Rv2680_day32 | -0.576 | 0.184 |
H37Rv_KO_MarP | -0.044 | 0.459 |
hypoxia_3wks | -0.722 | -0.315 |
hypoxia_6wks | 0.777 | -0.031 |
glycerol | -0.434 | 0.553 |
cholesterol | -0.054 | -0.164 |
AJ | 0.413 | -0.629 |
Bibs02 | 0.128 | -1.25 |
Bibs02c | 0.373 | 0.638 |
BL6 | -0.111 | -1.299 |
BL6a | 0.528 | -0.033 |
BXD01 | -0.36 | -0.933 |
BXD010 | 0.594 | 0.595 |
BXD011 | 0.784 | 0.081 |
BXD03 | -0.231 | -1.289 |
BXD04 | 0.073 | -0.581 |
BXD05 | 0.281 | 0.086 |
BXD06 | 0.168 | -0.435 |
BXD07 | -0.051 | -0.222 |
BXD08 | 0.574 | -0.931 |
BXD09 | 0.375 | -0.184 |
CAST | 0.055 | -0.324 |
CCcont | -0.389 | -1.924 |
DS01 | 0.084 | -0.058 |
DS02 | -0.027 | -0.246 |
DS04 | 0.915 | -0.505 |
DS0c | 0.883 | -0.284 |
GP01 | 0.641 | -0.614 |
GP02 | 1.001 | -0.102 |
GP0c | 0.672 | -0.734 |
NOD | 0.054 | 0.805 |
NZO | 0.532 | -0.964 |
PWK | 0.31 | 0.033 |
H37Rv_KO_CtpC | 0.753 | 0.104 |
H37Rv_KO_CtpD | 0.728 | -0.251 |
H37Rv_KO_Rv1272 | 1.669 | 0.998 |
H37Rv_KO_SugABC | 1.084 | 0.159 |
H37Rv_KO_MbtN | 0.682 | -0.597 |
Trans05 | 0.714 | 0.103 |
macrophage_unactivated | 0.0 | -0.376 |
IL1 | -0.629 | 0.273 |
Rapamycin | 0.531 | -0.761 |
Tcell | -0.355 | -0.124 |
GMCSF | 0.169 | -0.597 |
IFNab | -0.46 | -0.057 |
IFNg | 1.066 | 0.43 |
IFNg_GMCSF1 | 0.0 | 0.346 |
Rv1432_day32 | 1.701 | 0.621 |
Rv1565c_day32 | 0.782 | -1.199 |
secA2_input | 1.071 | -1.276 |
delta_Rv3594 | 0.408 | 1.115 |
delta_Rv3717 | 0.239 | 0.203 |
delta_Rv3811 | 0.253 | 1.715 |
delta_Rv0954 | 0.27 | 0.048 |
PonA1 | 0.173 | -0.235 |
EccD1_KO | 0.395 | 1.579 |
EspI_KO | 1.184 | 1.845 |
PE35_KO | 1.345 | 3.106 |
PPE68_KO | 1.123 | 3.318 |
glycerol2 | -0.789 | -1.544 |
lignocerate | -0.66 | -2.176 |
oleate | -0.196 | -1.198 |
phosphatidylcholine | -0.508 | -1.751 |
acetate | -1.122 | -2.622 |
glucAc | -0.931 | -2.001 |
Rv0950ko | -0.703 | 0.464 |
Rv1096ko | -0.703 | -0.341 |
Rv3684ko | -0.963 | -0.144 |
delta_otsA_trehalose | -0.303 | 0.272 |