Top 10 genes with highest correlation to Rv1418/lprH:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3008/- | (cc=0.56) | info on Rv3008/- |
| Rv0588/yrbE2B | (cc=0.4638) | info on Rv0588/yrbE2B |
| Rv0052/- | (cc=0.4475) | info on Rv0052/- |
| Rv3521/- | (cc=0.4389) | info on Rv3521/- |
| Rv0781/ptrBa | (cc=0.4335) | info on Rv0781/ptrBa |
| Rv0500/proC | (cc=0.429) | info on Rv0500/proC |
| Rv3125c/PPE49 | (cc=0.426) | info on Rv3125c/PPE49 |
| Rv3796/- | (cc=0.4236) | info on Rv3796/- |
| Rv1050/- | (cc=0.4206) | info on Rv1050/- |
| Rv0828c/- | (cc=0.4177) | info on Rv0828c/- |
Correlation of Rv1418/lprH with Rv3125c/PPE49
Normalized LFCs for Rv1418/lprH:
(description and provenance of datasets)
| Rv1418/lprH | Rv3125c/PPE49 | |
| Fe_supp_jason_reseq | -0.534 | 0.477 |
| low_pH_jason_reseq | -0.478 | -0.905 |
| NO_jason_reseq | -0.284 | -0.341 |
| B6_jason_reseq | 0.122 | -0.782 |
| MHCII_jason_reseq | 0.04 | -0.117 |
| Isoniazid02 | -0.451 | -1.523 |
| Rifampicin4 | 0.883 | 0.601 |
| Ethambutol3 | -0.659 | -0.043 |
| Meropenem3 | -0.52 | -0.69 |
| Vancomycin16 | 0.387 | -0.401 |
| Rv2680_day32 | -0.721 | 0.166 |
| H37Rv_KO_MarP | 0.84 | 0.416 |
| hypoxia_3wks | -0.403 | 0.156 |
| hypoxia_6wks | -0.161 | -0.301 |
| glycerol | -0.173 | -0.758 |
| cholesterol | -0.01 | -0.625 |
| AJ | 0.134 | -0.407 |
| Bibs02 | -0.156 | -0.477 |
| Bibs02c | -0.247 | -0.565 |
| BL6 | 0.654 | 0.71 |
| BL6a | 0.565 | 0.591 |
| BXD01 | 0.552 | 0.585 |
| BXD010 | 0.581 | 0.68 |
| BXD011 | 0.602 | 0.847 |
| BXD03 | 0.566 | 0.866 |
| BXD04 | 0.524 | 0.919 |
| BXD05 | 0.86 | 1.016 |
| BXD06 | 0.752 | 0.893 |
| BXD07 | 1.155 | 0.858 |
| BXD08 | 0.666 | 0.984 |
| BXD09 | 0.909 | 0.923 |
| CAST | 0.352 | -0.404 |
| CCcont | 0.066 | 0.879 |
| DS01 | 0.315 | -0.524 |
| DS02 | 0.682 | -0.102 |
| DS04 | 0.382 | -0.322 |
| DS0c | 0.273 | -0.137 |
| GP01 | -0.24 | -0.031 |
| GP02 | -0.603 | 0.54 |
| GP0c | -0.187 | -0.314 |
| NOD | 0.225 | -0.034 |
| NZO | 0.488 | -0.98 |
| PWK | 0.56 | -0.206 |
| H37Rv_KO_CtpC | -0.291 | 0.68 |
| H37Rv_KO_CtpD | 1.111 | 1.285 |
| H37Rv_KO_Rv1272 | -0.01 | 0.806 |
| H37Rv_KO_SugABC | 0.288 | 1.266 |
| H37Rv_KO_MbtN | -0.29 | 0.88 |
| Trans05 | 0.249 | 0.694 |
| macrophage_unactivated | 0.669 | -0.126 |
| IL1 | 0.442 | -0.208 |
| Rapamycin | 0.651 | -0.365 |
| Tcell | -0.648 | -0.326 |
| GMCSF | 0.018 | -0.137 |
| IFNab | -0.109 | -0.396 |
| IFNg | 0.329 | -0.045 |
| IFNg_GMCSF1 | 0.666 | 0.493 |
| Rv1432_day32 | 1.027 | -0.063 |
| Rv1565c_day32 | 0.771 | -0.232 |
| secA2_input | -0.559 | -0.567 |
| delta_Rv3594 | -0.069 | 0.347 |
| delta_Rv3717 | 0.274 | 0.193 |
| delta_Rv3811 | 0.228 | 0.454 |
| delta_Rv0954 | 0.093 | -0.619 |
| PonA1 | 1.154 | -0.02 |
| EccD1_KO | 0.194 | 0.355 |
| EspI_KO | -0.106 | 0.191 |
| PE35_KO | -1.129 | 0.292 |
| PPE68_KO | -0.534 | 0.054 |
| glycerol2 | 0.185 | -0.175 |
| lignocerate | -0.279 | -0.373 |
| oleate | 0.526 | -0.034 |
| phosphatidylcholine | 0.343 | -0.269 |
| acetate | -0.416 | -0.595 |
| glucAc | -0.49 | -0.52 |
| Rv0950ko | 0.434 | 0.35 |
| Rv1096ko | 0.863 | 0.06 |
| Rv3684ko | 0.347 | -0.157 |
| delta_otsA_trehalose | -1.113 | -1.215 |