Top 10 genes with highest correlation to Rv1377c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0329c/- | (cc=0.4981) | info on Rv0329c/- |
| Rv0664/vapB8 | (cc=0.4956) | info on Rv0664/vapB8 |
| Rv2499c/- | (cc=0.4812) | info on Rv2499c/- |
| Rv2009/vapB15 | (cc=0.478) | info on Rv2009/vapB15 |
| Rv2802c/- | (cc=0.4693) | info on Rv2802c/- |
| Rv1192/- | (cc=0.458) | info on Rv1192/- |
| Rv1186c/- | (cc=0.4524) | info on Rv1186c/- |
| Rv1974/- | (cc=0.4448) | info on Rv1974/- |
| Rv1731/gabD2 | (cc=0.4447) | info on Rv1731/gabD2 |
| Rv2813/- | (cc=0.4369) | info on Rv2813/- |
Correlation of Rv1377c/- with Rv2499c/-
Normalized LFCs for Rv1377c/-:
(description and provenance of datasets)
| Rv1377c/- | Rv2499c/- | |
| Fe_supp_jason_reseq | 1.35 | -0.616 |
| low_pH_jason_reseq | -0.952 | -1.8 |
| NO_jason_reseq | 0.042 | -0.924 |
| B6_jason_reseq | -0.018 | 1.142 |
| MHCII_jason_reseq | 0.206 | -1.609 |
| Isoniazid02 | 0.658 | -0.872 |
| Rifampicin4 | 0.81 | 0.533 |
| Ethambutol3 | 0.209 | -0.694 |
| Meropenem3 | 0.987 | 0.195 |
| Vancomycin16 | 1.035 | 0.247 |
| Rv2680_day32 | 0.142 | 0.0 |
| H37Rv_KO_MarP | 0.323 | 0.174 |
| hypoxia_3wks | -0.574 | -0.742 |
| hypoxia_6wks | -0.819 | -0.388 |
| glycerol | 0.496 | 0.967 |
| cholesterol | 0.857 | -0.119 |
| AJ | 0.032 | -0.343 |
| Bibs02 | 0.617 | 0.26 |
| Bibs02c | -0.462 | -1.214 |
| BL6 | -0.465 | -2.242 |
| BL6a | 0.0 | -2.115 |
| BXD01 | 0.335 | -2.665 |
| BXD010 | 0.071 | -2.664 |
| BXD011 | -0.185 | -2.425 |
| BXD03 | 0.278 | -2.86 |
| BXD04 | -0.524 | -1.887 |
| BXD05 | -0.5 | -3.683 |
| BXD06 | 0.083 | -2.522 |
| BXD07 | 0.14 | -3.265 |
| BXD08 | 0.281 | -2.572 |
| BXD09 | -0.18 | -3.757 |
| CAST | 0.554 | -0.622 |
| CCcont | 0.021 | -1.876 |
| DS01 | -0.481 | -1.617 |
| DS02 | 0.734 | -0.791 |
| DS04 | 0.645 | -1.667 |
| DS0c | 0.903 | -1.086 |
| GP01 | 0.576 | -2.003 |
| GP02 | -0.276 | -3.206 |
| GP0c | 0.632 | -2.75 |
| NOD | 1.84 | -0.552 |
| NZO | 0.879 | -0.509 |
| PWK | 0.122 | -0.401 |
| H37Rv_KO_CtpC | -0.759 | -3.906 |
| H37Rv_KO_CtpD | -1.164 | -3.139 |
| H37Rv_KO_Rv1272 | -1.011 | -1.794 |
| H37Rv_KO_SugABC | -0.543 | -2.382 |
| H37Rv_KO_MbtN | -1.402 | -3.225 |
| Trans05 | -0.243 | -4.218 |
| macrophage_unactivated | -0.439 | -2.538 |
| IL1 | 0.492 | -2.322 |
| Rapamycin | 0.479 | -4.431 |
| Tcell | 0.345 | -1.672 |
| GMCSF | 0.198 | -3.725 |
| IFNab | 0.414 | -3.292 |
| IFNg | 0.257 | -4.137 |
| IFNg_GMCSF1 | -0.176 | -1.141 |
| Rv1432_day32 | -0.437 | -1.549 |
| Rv1565c_day32 | -0.34 | -0.981 |
| secA2_input | 0.163 | -0.853 |
| delta_Rv3594 | 0.502 | 0.676 |
| delta_Rv3717 | 0.098 | 0.453 |
| delta_Rv3811 | 0.138 | 1.121 |
| delta_Rv0954 | 0.928 | -0.509 |
| PonA1 | 1.019 | 0.634 |
| EccD1_KO | 0.76 | 0.835 |
| EspI_KO | -0.627 | 1.021 |
| PE35_KO | 0.35 | 0.96 |
| PPE68_KO | 0.195 | 0.96 |
| glycerol2 | 0.326 | 1.667 |
| lignocerate | 0.878 | 2.366 |
| oleate | -0.535 | -2.006 |
| phosphatidylcholine | 1.2 | 1.902 |
| acetate | 1.406 | 2.258 |
| glucAc | 1.266 | 1.881 |
| Rv0950ko | 1.381 | 0.133 |
| Rv1096ko | 0.811 | -1.948 |
| Rv3684ko | 0.881 | -0.458 |
| delta_otsA_trehalose | 0.974 | 1.593 |