Top 10 genes with highest correlation to Rv1376/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0964c/- | (cc=0.5937) | info on Rv0964c/- |
| Rv1057/- | (cc=0.5492) | info on Rv1057/- |
| Rv3605c/- | (cc=0.5253) | info on Rv3605c/- |
| Rv1180/pks3 | (cc=0.5185) | info on Rv1180/pks3 |
| Rv0758/phoR | (cc=0.5152) | info on Rv0758/phoR |
| Rv2633c/- | (cc=0.5098) | info on Rv2633c/- |
| Rv2474c/- | (cc=0.5087) | info on Rv2474c/- |
| Rv3354/- | (cc=0.5009) | info on Rv3354/- |
| Rv0441c/- | (cc=0.4967) | info on Rv0441c/- |
| Rv2636/- | (cc=0.4963) | info on Rv2636/- |
Correlation of Rv1376/- with Rv0964c/-
Normalized LFCs for Rv1376/-:
(description and provenance of datasets)
| Rv1376/- | Rv0964c/- | |
| Fe_supp_jason_reseq | -0.511 | -2.796 |
| low_pH_jason_reseq | 1.705 | 0.524 |
| NO_jason_reseq | -0.192 | -0.953 |
| B6_jason_reseq | 0.374 | 0.912 |
| MHCII_jason_reseq | 0.866 | 0.963 |
| Isoniazid02 | 0.541 | 0.242 |
| Rifampicin4 | 0.796 | 0.663 |
| Ethambutol3 | 0.564 | -0.303 |
| Meropenem3 | -0.071 | -0.277 |
| Vancomycin16 | 0.061 | 0.366 |
| Rv2680_day32 | -0.323 | -0.423 |
| H37Rv_KO_MarP | 0.27 | -0.085 |
| hypoxia_3wks | 0.08 | 0.0 |
| hypoxia_6wks | -0.086 | 0.699 |
| glycerol | 0.187 | -0.149 |
| cholesterol | -0.353 | -0.378 |
| AJ | 0.484 | -0.619 |
| Bibs02 | -0.682 | 0.461 |
| Bibs02c | 0.133 | 0.249 |
| BL6 | -0.251 | -0.242 |
| BL6a | -0.105 | -0.815 |
| BXD01 | -0.904 | -1.849 |
| BXD010 | -0.79 | -2.665 |
| BXD011 | -0.149 | -1.69 |
| BXD03 | -0.595 | 0.14 |
| BXD04 | -0.55 | -1.484 |
| BXD05 | -0.57 | -2.345 |
| BXD06 | -0.512 | -1.655 |
| BXD07 | -0.97 | -1.183 |
| BXD08 | -0.731 | -1.414 |
| BXD09 | -0.618 | -1.783 |
| CAST | 0.402 | 1.098 |
| CCcont | 0.119 | -0.802 |
| DS01 | -0.368 | 0.739 |
| DS02 | -0.022 | 0.707 |
| DS04 | 0.0 | 0.802 |
| DS0c | -0.278 | 0.33 |
| GP01 | 0.639 | -0.176 |
| GP02 | 1.11 | -0.148 |
| GP0c | 0.169 | 0.267 |
| NOD | 0.438 | 0.399 |
| NZO | -0.503 | -0.63 |
| PWK | -0.213 | 0.081 |
| H37Rv_KO_CtpC | -1.299 | -2.904 |
| H37Rv_KO_CtpD | 0.172 | 0.829 |
| H37Rv_KO_Rv1272 | -0.562 | -1.711 |
| H37Rv_KO_SugABC | -0.799 | -0.634 |
| H37Rv_KO_MbtN | -0.14 | -1.751 |
| Trans05 | -0.889 | -1.834 |
| macrophage_unactivated | -0.303 | -0.275 |
| IL1 | -0.05 | 0.092 |
| Rapamycin | -0.018 | 0.095 |
| Tcell | -0.192 | 0.365 |
| GMCSF | -0.061 | 0.689 |
| IFNab | -0.599 | -1.046 |
| IFNg | 0.195 | -0.452 |
| IFNg_GMCSF1 | -0.053 | -0.035 |
| Rv1432_day32 | 0.189 | 1.55 |
| Rv1565c_day32 | 0.104 | -2.41 |
| secA2_input | 0.756 | 0.388 |
| delta_Rv3594 | -0.012 | -0.203 |
| delta_Rv3717 | -0.083 | -0.321 |
| delta_Rv3811 | -0.589 | -1.02 |
| delta_Rv0954 | 0.141 | -1.344 |
| PonA1 | 0.91 | -0.756 |
| EccD1_KO | 0.687 | 0.52 |
| EspI_KO | 0.285 | -0.508 |
| PE35_KO | 0.292 | 1.088 |
| PPE68_KO | 0.448 | 1.657 |
| glycerol2 | 0.374 | 2.826 |
| lignocerate | 0.855 | 3.942 |
| oleate | 0.305 | 1.969 |
| phosphatidylcholine | 0.689 | 3.419 |
| acetate | 0.56 | 4.683 |
| glucAc | 0.686 | 3.524 |
| Rv0950ko | 0.329 | -0.178 |
| Rv1096ko | -0.25 | -0.458 |
| Rv3684ko | -0.416 | -0.786 |
| delta_otsA_trehalose | 0.594 | -0.415 |