Top 10 genes with highest correlation to Rv1360/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3327/- | (cc=0.5271) | info on Rv3327/- |
| Rv3219/whiB1 | (cc=0.5142) | info on Rv3219/whiB1 |
| Rv0999/- | (cc=0.5) | info on Rv0999/- |
| Rv0373c/- | (cc=0.4694) | info on Rv0373c/- |
| Rv3453/- | (cc=0.451) | info on Rv3453/- |
| Rv3775/lipE | (cc=0.4471) | info on Rv3775/lipE |
| Rv1860/apa | (cc=0.439) | info on Rv1860/apa |
| Rv0129c/fbpC | (cc=0.438) | info on Rv0129c/fbpC |
| Rv0862c/- | (cc=0.4371) | info on Rv0862c/- |
| Rv0361/- | (cc=0.4267) | info on Rv0361/- |
Correlation of Rv1360/- with Rv0999/-
Normalized LFCs for Rv1360/-:
(description and provenance of datasets)
| Rv1360/- | Rv0999/- | |
| Fe_supp_jason_reseq | -0.175 | 1.07 |
| low_pH_jason_reseq | -0.99 | -2.859 |
| NO_jason_reseq | -0.32 | -0.79 |
| B6_jason_reseq | 0.169 | -0.668 |
| MHCII_jason_reseq | 0.366 | -0.177 |
| Isoniazid02 | -1.455 | -1.18 |
| Rifampicin4 | -2.434 | -6.0 |
| Ethambutol3 | -0.929 | -3.222 |
| Meropenem3 | 1.791 | -3.835 |
| Vancomycin16 | -1.937 | -6.0 |
| Rv2680_day32 | 0.253 | -0.811 |
| H37Rv_KO_MarP | 0.368 | -0.865 |
| hypoxia_3wks | 0.235 | 0.056 |
| hypoxia_6wks | 0.28 | -0.307 |
| glycerol | 0.281 | 0.398 |
| cholesterol | 2.114 | 2.859 |
| AJ | 0.2 | -0.871 |
| Bibs02 | 0.268 | 0.925 |
| Bibs02c | 0.47 | -0.083 |
| BL6 | -0.114 | -1.211 |
| BL6a | 0.296 | -1.322 |
| BXD01 | -0.543 | -0.918 |
| BXD010 | -0.187 | -1.239 |
| BXD011 | -0.125 | 1.126 |
| BXD03 | 0.031 | -0.489 |
| BXD04 | -0.326 | -0.673 |
| BXD05 | 0.183 | -0.396 |
| BXD06 | -0.195 | -0.748 |
| BXD07 | 0.0 | -0.58 |
| BXD08 | -0.292 | -0.659 |
| BXD09 | -0.234 | -0.395 |
| CAST | 0.32 | -1.957 |
| CCcont | 0.109 | 0.991 |
| DS01 | 0.445 | -0.546 |
| DS02 | 0.093 | 0.429 |
| DS04 | 0.072 | -0.266 |
| DS0c | 0.206 | -0.396 |
| GP01 | -0.235 | 0.574 |
| GP02 | 0.366 | 1.568 |
| GP0c | -0.086 | 0.445 |
| NOD | 0.488 | -0.975 |
| NZO | -0.208 | -1.608 |
| PWK | 0.408 | -0.602 |
| H37Rv_KO_CtpC | -0.317 | 0.918 |
| H37Rv_KO_CtpD | -0.061 | 1.633 |
| H37Rv_KO_Rv1272 | -0.527 | -0.146 |
| H37Rv_KO_SugABC | 0.172 | 1.311 |
| H37Rv_KO_MbtN | -0.208 | -0.317 |
| Trans05 | -0.07 | -0.733 |
| macrophage_unactivated | -0.035 | 0.458 |
| IL1 | -0.033 | 0.608 |
| Rapamycin | 0.064 | 1.903 |
| Tcell | -0.081 | -1.082 |
| GMCSF | 0.576 | 0.584 |
| IFNab | -0.323 | 1.224 |
| IFNg | 0.249 | 0.051 |
| IFNg_GMCSF1 | -0.496 | 0.845 |
| Rv1432_day32 | -0.064 | -1.785 |
| Rv1565c_day32 | 0.114 | -0.815 |
| secA2_input | 0.016 | -0.437 |
| delta_Rv3594 | 0.497 | 1.088 |
| delta_Rv3717 | -0.164 | 0.487 |
| delta_Rv3811 | -0.065 | 0.77 |
| delta_Rv0954 | 0.516 | 0.674 |
| PonA1 | 0.804 | 0.188 |
| EccD1_KO | 0.329 | -0.789 |
| EspI_KO | 0.034 | 0.1 |
| PE35_KO | 0.455 | 0.137 |
| PPE68_KO | 0.115 | 0.189 |
| glycerol2 | 0.034 | -0.747 |
| lignocerate | 0.132 | -2.208 |
| oleate | -0.106 | -0.855 |
| phosphatidylcholine | 0.092 | -1.288 |
| acetate | -0.366 | -0.497 |
| glucAc | -0.192 | -2.262 |
| Rv0950ko | 0.121 | -1.601 |
| Rv1096ko | -0.38 | -0.989 |
| Rv3684ko | -0.033 | -1.189 |
| delta_otsA_trehalose | -0.424 | -0.862 |