Top 10 genes with highest correlation to Rv1345/mbtM:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2381c/mbtD | (cc=0.5701) | info on Rv2381c/mbtD |
| Rv2383c/mbtB | (cc=0.5617) | info on Rv2383c/mbtB |
| Rv2379c/mbtF | (cc=0.5434) | info on Rv2379c/mbtF |
| Rv2859c/- | (cc=0.5413) | info on Rv2859c/- |
| Rv0554/bpoC | (cc=0.5384) | info on Rv0554/bpoC |
| Rv0470c/pcaA | (cc=0.506) | info on Rv0470c/pcaA |
| Rv2418c/- | (cc=0.4922) | info on Rv2418c/- |
| Rv1287/- | (cc=0.4895) | info on Rv1287/- |
| Rv0248c/- | (cc=0.4745) | info on Rv0248c/- |
| Rv0406c/- | (cc=0.4743) | info on Rv0406c/- |
Correlation of Rv1345/mbtM with Rv2381c/mbtD
Normalized LFCs for Rv1345/mbtM:
(description and provenance of datasets)
| Rv1345/mbtM | Rv2381c/mbtD | |
| Fe_supp_jason_reseq | 0.587 | 0.766 |
| low_pH_jason_reseq | 0.41 | 0.979 |
| NO_jason_reseq | -0.213 | 0.0 |
| B6_jason_reseq | 1.386 | 0.0 |
| MHCII_jason_reseq | -2.488 | 0.0 |
| Isoniazid02 | 0.313 | 0.723 |
| Rifampicin4 | 0.412 | 0.634 |
| Ethambutol3 | 0.668 | 0.285 |
| Meropenem3 | 0.53 | 0.446 |
| Vancomycin16 | 1.048 | 0.621 |
| Rv2680_day32 | 0.756 | -0.131 |
| H37Rv_KO_MarP | 0.028 | 0.615 |
| hypoxia_3wks | -2.811 | -1.511 |
| hypoxia_6wks | -3.433 | -0.791 |
| glycerol | 0.034 | -0.168 |
| cholesterol | -0.017 | 0.216 |
| AJ | -0.22 | -0.193 |
| Bibs02 | -0.478 | -0.502 |
| Bibs02c | 0.214 | -0.365 |
| BL6 | -2.335 | -0.343 |
| BL6a | -0.448 | -0.165 |
| BXD01 | -0.922 | -0.358 |
| BXD010 | -0.771 | -0.352 |
| BXD011 | -0.793 | -0.35 |
| BXD03 | -2.275 | -0.371 |
| BXD04 | -0.417 | -0.34 |
| BXD05 | -0.967 | -0.369 |
| BXD06 | -0.11 | -0.111 |
| BXD07 | -1.108 | -0.38 |
| BXD08 | -1.081 | -0.365 |
| BXD09 | -1.407 | -0.386 |
| CAST | -1.34 | 0.0 |
| CCcont | -1.007 | 0.0 |
| DS01 | 0.693 | 1.514 |
| DS02 | 1.122 | 1.196 |
| DS04 | 1.067 | 0.0 |
| DS0c | 0.754 | 0.0 |
| GP01 | -1.128 | -0.271 |
| GP02 | -1.354 | -0.228 |
| GP0c | -3.508 | -0.357 |
| NOD | -0.371 | 0.0 |
| NZO | -0.14 | 0.155 |
| PWK | -1.77 | 0.152 |
| H37Rv_KO_CtpC | 0.294 | 0.0 |
| H37Rv_KO_CtpD | -0.94 | -0.348 |
| H37Rv_KO_Rv1272 | -1.842 | -0.387 |
| H37Rv_KO_SugABC | -1.036 | -0.272 |
| H37Rv_KO_MbtN | -1.143 | -0.283 |
| Trans05 | -1.901 | -0.359 |
| macrophage_unactivated | -0.069 | 0.83 |
| IL1 | 0.439 | 0.409 |
| Rapamycin | 0.862 | 0.0 |
| Tcell | 2.643 | 1.58 |
| GMCSF | -1.001 | 0.0 |
| IFNab | -3.229 | 0.0 |
| IFNg | -0.059 | 0.0 |
| IFNg_GMCSF1 | -0.361 | 0.0 |
| Rv1432_day32 | 0.173 | -0.18 |
| Rv1565c_day32 | 0.847 | 1.579 |
| secA2_input | -0.46 | 0.0 |
| delta_Rv3594 | -1.106 | -0.717 |
| delta_Rv3717 | -0.108 | -0.59 |
| delta_Rv3811 | -1.109 | -0.87 |
| delta_Rv0954 | 1.55 | -0.606 |
| PonA1 | 0.738 | 0.851 |
| EccD1_KO | 0.832 | 0.921 |
| EspI_KO | 0.348 | 0.285 |
| PE35_KO | -0.277 | 1.059 |
| PPE68_KO | 0.109 | 1.161 |
| glycerol2 | -0.231 | 0.369 |
| lignocerate | -0.521 | 0.591 |
| oleate | 1.005 | 0.196 |
| phosphatidylcholine | -0.675 | 0.368 |
| acetate | 0.549 | 0.63 |
| glucAc | 0.258 | 0.877 |
| Rv0950ko | 0.525 | -0.793 |
| Rv1096ko | -0.419 | 0.0 |
| Rv3684ko | 0.0 | 0.255 |
| delta_otsA_trehalose | 1.01 | 0.336 |