Top 10 genes with highest correlation to Rv1344/mbtL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0877/- | (cc=0.491) | info on Rv0877/- |
| Rv3135/PPE50 | (cc=0.4572) | info on Rv3135/PPE50 |
| Rv0458/- | (cc=0.4367) | info on Rv0458/- |
| Rv2081c/- | (cc=0.4298) | info on Rv2081c/- |
| Rv1115/- | (cc=0.4277) | info on Rv1115/- |
| Rv1105/- | (cc=0.413) | info on Rv1105/- |
| Rv1546/- | (cc=0.403) | info on Rv1546/- |
| Rv0826/- | (cc=0.3995) | info on Rv0826/- |
| Rv3718c/- | (cc=0.3969) | info on Rv3718c/- |
| Rv3714c/- | (cc=0.3941) | info on Rv3714c/- |
Correlation of Rv1344/mbtL with Rv3718c/-
Normalized LFCs for Rv1344/mbtL:
(description and provenance of datasets)
| Rv1344/mbtL | Rv3718c/- | |
| Fe_supp_jason_reseq | 0.928 | 0.496 |
| low_pH_jason_reseq | -0.475 | -2.023 |
| NO_jason_reseq | 1.814 | 1.67 |
| B6_jason_reseq | 1.5 | 0.063 |
| MHCII_jason_reseq | 0.15 | 1.45 |
| Isoniazid02 | 1.43 | -0.339 |
| Rifampicin4 | 0.043 | -1.143 |
| Ethambutol3 | 1.155 | 0.333 |
| Meropenem3 | 0.822 | 0.471 |
| Vancomycin16 | 0.846 | 0.0 |
| Rv2680_day32 | 1.582 | -0.898 |
| H37Rv_KO_MarP | -0.303 | -0.262 |
| hypoxia_3wks | 0.231 | -1.049 |
| hypoxia_6wks | 0.812 | 0.363 |
| glycerol | -2.212 | -0.784 |
| cholesterol | -1.461 | 0.165 |
| AJ | 0.24 | 0.718 |
| Bibs02 | -0.191 | -0.335 |
| Bibs02c | -0.077 | 0.17 |
| BL6 | -0.664 | -0.126 |
| BL6a | 0.036 | 0.75 |
| BXD01 | 0.561 | 1.572 |
| BXD010 | 0.943 | 1.501 |
| BXD011 | 1.258 | 1.054 |
| BXD03 | 0.465 | -0.21 |
| BXD04 | 0.312 | 0.23 |
| BXD05 | 1.026 | 0.554 |
| BXD06 | 0.854 | 1.319 |
| BXD07 | 1.218 | 1.06 |
| BXD08 | 0.418 | 0.672 |
| BXD09 | 0.635 | 0.975 |
| CAST | -0.359 | 0.382 |
| CCcont | -0.633 | 0.489 |
| DS01 | 1.203 | -0.116 |
| DS02 | 1.358 | 0.693 |
| DS04 | 0.103 | -1.525 |
| DS0c | 0.361 | -0.804 |
| GP01 | 0.061 | -0.383 |
| GP02 | 0.061 | 2.628 |
| GP0c | -0.499 | 0.481 |
| NOD | -0.01 | 0.08 |
| NZO | 0.627 | -0.098 |
| PWK | -0.412 | 1.249 |
| H37Rv_KO_CtpC | -0.154 | -1.752 |
| H37Rv_KO_CtpD | -0.562 | -2.086 |
| H37Rv_KO_Rv1272 | 0.905 | 0.385 |
| H37Rv_KO_SugABC | -1.79 | -2.141 |
| H37Rv_KO_MbtN | 1.088 | 0.594 |
| Trans05 | 1.116 | 0.062 |
| macrophage_unactivated | -0.019 | -0.852 |
| IL1 | 1.109 | 0.822 |
| Rapamycin | -0.227 | -0.534 |
| Tcell | 0.538 | -1.118 |
| GMCSF | -0.28 | 0.182 |
| IFNab | -1.427 | 0.0 |
| IFNg | -0.388 | -0.917 |
| IFNg_GMCSF1 | 0.273 | -2.064 |
| Rv1432_day32 | -0.33 | 0.0 |
| Rv1565c_day32 | 0.03 | 0.643 |
| secA2_input | 0.189 | 0.191 |
| delta_Rv3594 | 0.572 | -1.556 |
| delta_Rv3717 | 1.258 | 0.576 |
| delta_Rv3811 | -0.574 | -0.922 |
| delta_Rv0954 | -0.64 | -0.345 |
| PonA1 | 0.596 | -0.407 |
| EccD1_KO | -0.697 | -0.553 |
| EspI_KO | 0.667 | 0.171 |
| PE35_KO | -0.7 | -1.482 |
| PPE68_KO | -0.678 | -2.032 |
| glycerol2 | 0.102 | -0.318 |
| lignocerate | -1.033 | -1.628 |
| oleate | 1.134 | -1.255 |
| phosphatidylcholine | -0.689 | -2.801 |
| acetate | -0.557 | -0.758 |
| glucAc | -0.266 | -0.858 |
| Rv0950ko | 0.959 | -1.444 |
| Rv1096ko | -0.084 | -0.784 |
| Rv3684ko | 1.487 | 0.111 |
| delta_otsA_trehalose | -0.686 | -0.072 |