Top 10 genes with highest correlation to Rv1344/mbtL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0877/- | (cc=0.491) | info on Rv0877/- |
| Rv3135/PPE50 | (cc=0.4572) | info on Rv3135/PPE50 |
| Rv0458/- | (cc=0.4367) | info on Rv0458/- |
| Rv2081c/- | (cc=0.4298) | info on Rv2081c/- |
| Rv1115/- | (cc=0.4277) | info on Rv1115/- |
| Rv1105/- | (cc=0.413) | info on Rv1105/- |
| Rv1546/- | (cc=0.403) | info on Rv1546/- |
| Rv0826/- | (cc=0.3995) | info on Rv0826/- |
| Rv3718c/- | (cc=0.3969) | info on Rv3718c/- |
| Rv3714c/- | (cc=0.3941) | info on Rv3714c/- |
Correlation of Rv1344/mbtL with Rv3135/PPE50
Normalized LFCs for Rv1344/mbtL:
(description and provenance of datasets)
| Rv1344/mbtL | Rv3135/PPE50 | |
| Fe_supp_jason_reseq | 0.928 | 0.688 |
| low_pH_jason_reseq | -0.475 | 0.174 |
| NO_jason_reseq | 1.814 | 2.801 |
| B6_jason_reseq | 1.5 | 2.183 |
| MHCII_jason_reseq | 0.15 | 1.116 |
| Isoniazid02 | 1.43 | 3.336 |
| Rifampicin4 | 0.043 | -2.285 |
| Ethambutol3 | 1.155 | 1.802 |
| Meropenem3 | 0.822 | 3.717 |
| Vancomycin16 | 0.846 | -2.995 |
| Rv2680_day32 | 1.582 | 2.964 |
| H37Rv_KO_MarP | -0.303 | 1.094 |
| hypoxia_3wks | 0.231 | 0.562 |
| hypoxia_6wks | 0.812 | -1.061 |
| glycerol | -2.212 | -4.007 |
| cholesterol | -1.461 | -5.184 |
| AJ | 0.24 | -2.508 |
| Bibs02 | -0.191 | -1.37 |
| Bibs02c | -0.077 | -1.193 |
| BL6 | -0.664 | -3.041 |
| BL6a | 0.036 | -1.129 |
| BXD01 | 0.561 | -1.012 |
| BXD010 | 0.943 | -0.585 |
| BXD011 | 1.258 | -0.534 |
| BXD03 | 0.465 | -2.318 |
| BXD04 | 0.312 | 0.107 |
| BXD05 | 1.026 | -0.724 |
| BXD06 | 0.854 | -0.534 |
| BXD07 | 1.218 | -1.596 |
| BXD08 | 0.418 | -0.665 |
| BXD09 | 0.635 | -1.041 |
| CAST | -0.359 | -1.864 |
| CCcont | -0.633 | -1.868 |
| DS01 | 1.203 | -2.247 |
| DS02 | 1.358 | -0.487 |
| DS04 | 0.103 | -2.562 |
| DS0c | 0.361 | -1.138 |
| GP01 | 0.061 | -4.382 |
| GP02 | 0.061 | -3.217 |
| GP0c | -0.499 | -5.348 |
| NOD | -0.01 | -1.914 |
| NZO | 0.627 | -0.813 |
| PWK | -0.412 | -1.82 |
| H37Rv_KO_CtpC | -0.154 | -0.453 |
| H37Rv_KO_CtpD | -0.562 | 0.28 |
| H37Rv_KO_Rv1272 | 0.905 | -2.059 |
| H37Rv_KO_SugABC | -1.79 | -1.424 |
| H37Rv_KO_MbtN | 1.088 | -2.371 |
| Trans05 | 1.116 | -1.383 |
| macrophage_unactivated | -0.019 | -2.209 |
| IL1 | 1.109 | -0.715 |
| Rapamycin | -0.227 | -1.163 |
| Tcell | 0.538 | 1.137 |
| GMCSF | -0.28 | -0.853 |
| IFNab | -1.427 | -1.769 |
| IFNg | -0.388 | 0.623 |
| IFNg_GMCSF1 | 0.273 | -0.217 |
| Rv1432_day32 | -0.33 | 2.57 |
| Rv1565c_day32 | 0.03 | -2.088 |
| secA2_input | 0.189 | -1.736 |
| delta_Rv3594 | 0.572 | -1.065 |
| delta_Rv3717 | 1.258 | -1.501 |
| delta_Rv3811 | -0.574 | -1.205 |
| delta_Rv0954 | -0.64 | -1.047 |
| PonA1 | 0.596 | -1.091 |
| EccD1_KO | -0.697 | -2.937 |
| EspI_KO | 0.667 | -2.033 |
| PE35_KO | -0.7 | -1.61 |
| PPE68_KO | -0.678 | -1.465 |
| glycerol2 | 0.102 | 1.188 |
| lignocerate | -1.033 | -1.594 |
| oleate | 1.134 | 1.752 |
| phosphatidylcholine | -0.689 | 0.045 |
| acetate | -0.557 | -0.72 |
| glucAc | -0.266 | -1.299 |
| Rv0950ko | 0.959 | 0.024 |
| Rv1096ko | -0.084 | -1.342 |
| Rv3684ko | 1.487 | 0.671 |
| delta_otsA_trehalose | -0.686 | -2.409 |