Top 10 genes with highest correlation to Rv1316c/ogt:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2633c/- | (cc=0.6365) | info on Rv2633c/- |
| Rv2499c/- | (cc=0.6308) | info on Rv2499c/- |
| Rv3295/- | (cc=0.6307) | info on Rv3295/- |
| Rv3353c/- | (cc=0.627) | info on Rv3353c/- |
| Rv0228/- | (cc=0.6115) | info on Rv0228/- |
| Rv0008c/- | (cc=0.5988) | info on Rv0008c/- |
| Rv1087/PE_PGRS21 | (cc=0.5815) | info on Rv1087/PE_PGRS21 |
| Rv2657c/- | (cc=0.5776) | info on Rv2657c/- |
| Rv3354/- | (cc=0.5751) | info on Rv3354/- |
| Rv1160/mutT2 | (cc=0.575) | info on Rv1160/mutT2 |
Correlation of Rv1316c/ogt with Rv0228/-
Normalized LFCs for Rv1316c/ogt:
(description and provenance of datasets)
| Rv1316c/ogt | Rv0228/- | |
| Fe_supp_jason_reseq | -0.305 | 1.07 |
| low_pH_jason_reseq | -0.484 | 0.0 |
| NO_jason_reseq | -0.144 | 0.0 |
| B6_jason_reseq | 0.689 | 1.759 |
| MHCII_jason_reseq | -0.239 | 0.37 |
| Isoniazid02 | -1.184 | -0.167 |
| Rifampicin4 | 0.084 | 0.558 |
| Ethambutol3 | -0.398 | -0.14 |
| Meropenem3 | -0.205 | 0.128 |
| Vancomycin16 | -0.645 | 0.796 |
| Rv2680_day32 | -1.645 | 0.0 |
| H37Rv_KO_MarP | -0.834 | -0.684 |
| hypoxia_3wks | -0.207 | 0.678 |
| hypoxia_6wks | -0.938 | -0.626 |
| glycerol | 0.158 | 0.585 |
| cholesterol | 0.495 | 0.915 |
| AJ | -0.054 | 0.05 |
| Bibs02 | -0.17 | 0.56 |
| Bibs02c | -0.283 | -1.66 |
| BL6 | -0.672 | -2.023 |
| BL6a | -1.28 | -2.66 |
| BXD01 | -0.928 | -2.107 |
| BXD010 | -0.601 | -2.072 |
| BXD011 | -1.118 | -2.06 |
| BXD03 | -1.76 | -2.187 |
| BXD04 | -0.99 | -2.0 |
| BXD05 | -1.788 | -2.177 |
| BXD06 | -1.258 | -2.159 |
| BXD07 | -0.537 | -2.24 |
| BXD08 | -0.909 | -2.151 |
| BXD09 | -1.686 | -2.273 |
| CAST | 0.392 | -0.389 |
| CCcont | -0.987 | -2.131 |
| DS01 | 0.293 | -0.727 |
| DS02 | -0.334 | -1.942 |
| DS04 | -0.281 | 0.779 |
| DS0c | -0.352 | -1.431 |
| GP01 | 0.29 | -1.597 |
| GP02 | -0.723 | -1.346 |
| GP0c | -0.733 | -2.103 |
| NOD | 0.151 | -0.83 |
| NZO | 0.247 | -0.285 |
| PWK | -0.038 | 0.168 |
| H37Rv_KO_CtpC | -0.63 | -2.628 |
| H37Rv_KO_CtpD | 0.982 | -1.922 |
| H37Rv_KO_Rv1272 | -0.419 | -2.281 |
| H37Rv_KO_SugABC | -1.432 | -1.503 |
| H37Rv_KO_MbtN | -0.343 | -1.667 |
| Trans05 | -0.485 | -1.983 |
| macrophage_unactivated | -1.089 | -2.923 |
| IL1 | -2.735 | -2.747 |
| Rapamycin | -2.388 | -2.842 |
| Tcell | -0.652 | -3.017 |
| GMCSF | -1.706 | -2.445 |
| IFNab | -2.352 | -2.799 |
| IFNg | -1.253 | -2.475 |
| IFNg_GMCSF1 | -1.361 | -1.386 |
| Rv1432_day32 | -0.614 | 0.0 |
| Rv1565c_day32 | -1.068 | 0.0 |
| secA2_input | -0.081 | 1.565 |
| delta_Rv3594 | 0.142 | 0.402 |
| delta_Rv3717 | 0.145 | 0.0 |
| delta_Rv3811 | -0.552 | 0.205 |
| delta_Rv0954 | 1.102 | 0.0 |
| PonA1 | -0.095 | 0.0 |
| EccD1_KO | -0.585 | -0.865 |
| EspI_KO | 0.091 | -0.359 |
| PE35_KO | 0.047 | -0.368 |
| PPE68_KO | -0.4 | -0.841 |
| glycerol2 | 0.895 | 0.0 |
| lignocerate | 0.476 | 0.591 |
| oleate | -0.231 | 0.0 |
| phosphatidylcholine | 0.431 | 0.193 |
| acetate | 1.149 | 0.0 |
| glucAc | 0.432 | 0.0 |
| Rv0950ko | 0.772 | 0.793 |
| Rv1096ko | -0.467 | 1.143 |
| Rv3684ko | -0.429 | 0.452 |
| delta_otsA_trehalose | 0.711 | 0.0 |