Top 10 genes with highest correlation to Rv1279/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2285/- | (cc=0.5662) | info on Rv2285/- |
| Rv2089c/pepE | (cc=0.5395) | info on Rv2089c/pepE |
| Rv1104/- | (cc=0.5362) | info on Rv1104/- |
| Rv1935c/echA13 | (cc=0.5151) | info on Rv1935c/echA13 |
| Rv2319c/- | (cc=0.5132) | info on Rv2319c/- |
| Rv2913c/- | (cc=0.513) | info on Rv2913c/- |
| Rv0962c/lprP | (cc=0.5093) | info on Rv0962c/lprP |
| Rv2515c/- | (cc=0.4948) | info on Rv2515c/- |
| Rv0177/- | (cc=0.4943) | info on Rv0177/- |
| Rv2629/- | (cc=0.4875) | info on Rv2629/- |
Correlation of Rv1279/- with Rv1935c/echA13
Normalized LFCs for Rv1279/-:
(description and provenance of datasets)
| Rv1279/- | Rv1935c/echA13 | |
| Fe_supp_jason_reseq | 0.508 | 0.286 |
| low_pH_jason_reseq | 0.13 | -0.44 |
| NO_jason_reseq | 0.399 | 0.1 |
| B6_jason_reseq | 0.578 | 1.142 |
| MHCII_jason_reseq | 0.125 | 0.481 |
| Isoniazid02 | 0.451 | 0.509 |
| Rifampicin4 | 0.065 | 0.753 |
| Ethambutol3 | 0.85 | 0.544 |
| Meropenem3 | 2.217 | 2.164 |
| Vancomycin16 | 0.098 | 0.708 |
| Rv2680_day32 | 0.171 | 0.694 |
| H37Rv_KO_MarP | -0.223 | 0.625 |
| hypoxia_3wks | 0.443 | 0.128 |
| hypoxia_6wks | 0.37 | 0.121 |
| glycerol | -0.884 | -2.017 |
| cholesterol | -0.325 | -0.744 |
| AJ | -0.212 | -0.069 |
| Bibs02 | 0.506 | -0.617 |
| Bibs02c | -0.541 | -0.347 |
| BL6 | -0.008 | -0.672 |
| BL6a | -0.349 | -0.496 |
| BXD01 | -0.326 | -0.571 |
| BXD010 | -0.035 | -0.472 |
| BXD011 | -0.224 | -0.537 |
| BXD03 | -0.114 | -0.727 |
| BXD04 | -0.42 | -0.783 |
| BXD05 | 0.293 | -0.056 |
| BXD06 | 0.0 | -0.71 |
| BXD07 | 0.295 | -0.213 |
| BXD08 | -0.299 | -0.62 |
| BXD09 | -0.118 | -0.063 |
| CAST | 0.092 | 0.21 |
| CCcont | -0.919 | -0.803 |
| DS01 | -0.115 | -0.648 |
| DS02 | -0.199 | -0.495 |
| DS04 | -0.42 | 0.177 |
| DS0c | -0.949 | -0.242 |
| GP01 | 0.389 | -0.131 |
| GP02 | 0.542 | 1.044 |
| GP0c | 0.233 | -0.556 |
| NOD | -0.763 | -0.353 |
| NZO | 0.532 | 0.581 |
| PWK | 0.141 | -0.838 |
| H37Rv_KO_CtpC | 0.095 | -2.121 |
| H37Rv_KO_CtpD | -1.052 | -0.688 |
| H37Rv_KO_Rv1272 | -0.341 | -1.737 |
| H37Rv_KO_SugABC | 0.199 | 0.188 |
| H37Rv_KO_MbtN | -0.888 | -2.394 |
| Trans05 | 0.313 | -0.434 |
| macrophage_unactivated | -0.057 | -0.369 |
| IL1 | -0.219 | 0.389 |
| Rapamycin | 0.055 | 0.454 |
| Tcell | -0.463 | -0.143 |
| GMCSF | 0.14 | 1.587 |
| IFNab | -0.054 | -0.115 |
| IFNg | 0.476 | -0.016 |
| IFNg_GMCSF1 | 0.085 | 0.515 |
| Rv1432_day32 | -0.076 | 0.42 |
| Rv1565c_day32 | 0.711 | -1.385 |
| secA2_input | 0.0 | -0.704 |
| delta_Rv3594 | 0.229 | -0.297 |
| delta_Rv3717 | 1.022 | 0.188 |
| delta_Rv3811 | 0.955 | -0.178 |
| delta_Rv0954 | 0.425 | -0.19 |
| PonA1 | 0.314 | 0.197 |
| EccD1_KO | 0.773 | 0.924 |
| EspI_KO | 0.813 | 0.194 |
| PE35_KO | 0.761 | 0.624 |
| PPE68_KO | 0.953 | 0.278 |
| glycerol2 | -0.406 | -1.003 |
| lignocerate | -0.712 | -0.632 |
| oleate | 0.045 | -0.313 |
| phosphatidylcholine | -0.602 | -0.374 |
| acetate | -0.372 | -0.989 |
| glucAc | -1.103 | -0.276 |
| Rv0950ko | -0.473 | 0.16 |
| Rv1096ko | 0.332 | 0.314 |
| Rv3684ko | 0.498 | 0.373 |
| delta_otsA_trehalose | -0.57 | 1.177 |