Top 10 genes with highest correlation to Rv1268c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1125/- | (cc=0.5538) | info on Rv1125/- |
| Rv1419/- | (cc=0.5532) | info on Rv1419/- |
| Rv3329/- | (cc=0.501) | info on Rv3329/- |
| Rv0934/pstS1 | (cc=0.4673) | info on Rv0934/pstS1 |
| Rv1169c/lipX | (cc=0.4658) | info on Rv1169c/lipX |
| Rv0343/iniC | (cc=0.4649) | info on Rv0343/iniC |
| Rv0940c/- | (cc=0.4299) | info on Rv0940c/- |
| Rv0413/mutT3 | (cc=0.4295) | info on Rv0413/mutT3 |
| Rv3525c/- | (cc=0.4287) | info on Rv3525c/- |
| Rv3572/- | (cc=0.4278) | info on Rv3572/- |
Correlation of Rv1268c/- with Rv0940c/-
Normalized LFCs for Rv1268c/-:
(description and provenance of datasets)
| Rv1268c/- | Rv0940c/- | |
| Fe_supp_jason_reseq | -0.802 | -0.546 |
| low_pH_jason_reseq | 0.244 | -0.445 |
| NO_jason_reseq | 0.339 | 0.126 |
| B6_jason_reseq | -0.594 | -0.989 |
| MHCII_jason_reseq | -0.153 | -0.421 |
| Isoniazid02 | -1.286 | -4.434 |
| Rifampicin4 | -0.23 | 0.482 |
| Ethambutol3 | -1.557 | -3.779 |
| Meropenem3 | -1.628 | -4.315 |
| Vancomycin16 | -0.952 | -1.417 |
| Rv2680_day32 | -0.462 | 0.113 |
| H37Rv_KO_MarP | -0.034 | -0.255 |
| hypoxia_3wks | 0.251 | -0.841 |
| hypoxia_6wks | 0.522 | 0.754 |
| glycerol | -0.196 | 0.316 |
| cholesterol | -0.381 | 0.168 |
| AJ | 0.77 | 0.57 |
| Bibs02 | 0.925 | -1.015 |
| Bibs02c | -0.285 | -0.311 |
| BL6 | 0.18 | 0.847 |
| BL6a | 0.083 | 0.284 |
| BXD01 | -0.266 | 0.715 |
| BXD010 | -0.324 | 1.34 |
| BXD011 | 0.744 | 0.711 |
| BXD03 | -0.245 | 0.332 |
| BXD04 | -0.044 | 1.328 |
| BXD05 | 0.076 | 0.263 |
| BXD06 | 0.104 | 1.327 |
| BXD07 | -0.398 | 1.065 |
| BXD08 | -0.021 | 0.743 |
| BXD09 | -0.044 | 0.917 |
| CAST | 0.008 | 0.754 |
| CCcont | -0.866 | 1.0 |
| DS01 | -0.009 | 0.719 |
| DS02 | 0.186 | 0.736 |
| DS04 | -0.378 | 1.234 |
| DS0c | 0.291 | -0.102 |
| GP01 | -0.62 | 0.312 |
| GP02 | -1.484 | -0.803 |
| GP0c | 0.059 | -0.446 |
| NOD | 0.068 | 0.469 |
| NZO | 0.205 | 1.52 |
| PWK | 0.125 | 0.254 |
| H37Rv_KO_CtpC | 0.213 | 0.585 |
| H37Rv_KO_CtpD | -1.787 | 0.147 |
| H37Rv_KO_Rv1272 | 0.352 | 1.095 |
| H37Rv_KO_SugABC | -1.647 | 0.088 |
| H37Rv_KO_MbtN | -1.324 | 0.528 |
| Trans05 | 0.467 | 0.895 |
| macrophage_unactivated | -0.701 | -0.082 |
| IL1 | -0.234 | -0.317 |
| Rapamycin | -0.242 | -0.16 |
| Tcell | -0.375 | 0.205 |
| GMCSF | 0.124 | -0.137 |
| IFNab | -0.015 | -1.868 |
| IFNg | 0.088 | -1.446 |
| IFNg_GMCSF1 | -0.427 | -1.197 |
| Rv1432_day32 | 0.167 | 1.249 |
| Rv1565c_day32 | 0.06 | 0.692 |
| secA2_input | -1.007 | -0.863 |
| delta_Rv3594 | -0.922 | -0.571 |
| delta_Rv3717 | -0.615 | -0.691 |
| delta_Rv3811 | -1.096 | -0.663 |
| delta_Rv0954 | 0.447 | -1.222 |
| PonA1 | -0.152 | -1.092 |
| EccD1_KO | 0.349 | 0.089 |
| EspI_KO | 0.143 | 1.087 |
| PE35_KO | -0.175 | 0.522 |
| PPE68_KO | 0.25 | 0.65 |
| glycerol2 | -0.056 | 1.375 |
| lignocerate | -0.17 | 2.046 |
| oleate | 0.245 | -0.469 |
| phosphatidylcholine | 0.283 | 1.426 |
| acetate | -0.037 | 1.812 |
| glucAc | -0.416 | 1.613 |
| Rv0950ko | -0.202 | -0.482 |
| Rv1096ko | 0.296 | -0.115 |
| Rv3684ko | -0.02 | -0.524 |
| delta_otsA_trehalose | -0.685 | 0.254 |