Top 10 genes with highest correlation to Rv1268c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1125/- | (cc=0.5538) | info on Rv1125/- |
| Rv1419/- | (cc=0.5532) | info on Rv1419/- |
| Rv3329/- | (cc=0.501) | info on Rv3329/- |
| Rv0934/pstS1 | (cc=0.4673) | info on Rv0934/pstS1 |
| Rv1169c/lipX | (cc=0.4658) | info on Rv1169c/lipX |
| Rv0343/iniC | (cc=0.4649) | info on Rv0343/iniC |
| Rv0940c/- | (cc=0.4299) | info on Rv0940c/- |
| Rv0413/mutT3 | (cc=0.4295) | info on Rv0413/mutT3 |
| Rv3525c/- | (cc=0.4287) | info on Rv3525c/- |
| Rv3572/- | (cc=0.4278) | info on Rv3572/- |
Correlation of Rv1268c/- with Rv0413/mutT3
Normalized LFCs for Rv1268c/-:
(description and provenance of datasets)
| Rv1268c/- | Rv0413/mutT3 | |
| Fe_supp_jason_reseq | -0.802 | -0.687 |
| low_pH_jason_reseq | 0.244 | 0.184 |
| NO_jason_reseq | 0.339 | 1.16 |
| B6_jason_reseq | -0.594 | 2.963 |
| MHCII_jason_reseq | -0.153 | -0.088 |
| Isoniazid02 | -1.286 | -4.688 |
| Rifampicin4 | -0.23 | -1.841 |
| Ethambutol3 | -1.557 | -2.768 |
| Meropenem3 | -1.628 | -2.323 |
| Vancomycin16 | -0.952 | -1.563 |
| Rv2680_day32 | -0.462 | -0.505 |
| H37Rv_KO_MarP | -0.034 | -0.124 |
| hypoxia_3wks | 0.251 | -0.136 |
| hypoxia_6wks | 0.522 | 0.374 |
| glycerol | -0.196 | 0.282 |
| cholesterol | -0.381 | 0.467 |
| AJ | 0.77 | 0.546 |
| Bibs02 | 0.925 | 0.536 |
| Bibs02c | -0.285 | -0.133 |
| BL6 | 0.18 | 1.424 |
| BL6a | 0.083 | 0.425 |
| BXD01 | -0.266 | 1.626 |
| BXD010 | -0.324 | 0.521 |
| BXD011 | 0.744 | 0.519 |
| BXD03 | -0.245 | 0.464 |
| BXD04 | -0.044 | 1.339 |
| BXD05 | 0.076 | 0.23 |
| BXD06 | 0.104 | 0.549 |
| BXD07 | -0.398 | 1.134 |
| BXD08 | -0.021 | 2.132 |
| BXD09 | -0.044 | 0.909 |
| CAST | 0.008 | 3.293 |
| CCcont | -0.866 | 0.272 |
| DS01 | -0.009 | -0.277 |
| DS02 | 0.186 | -0.072 |
| DS04 | -0.378 | 0.777 |
| DS0c | 0.291 | -0.064 |
| GP01 | -0.62 | 1.109 |
| GP02 | -1.484 | -0.691 |
| GP0c | 0.059 | -0.017 |
| NOD | 0.068 | 0.835 |
| NZO | 0.205 | 0.803 |
| PWK | 0.125 | 1.805 |
| H37Rv_KO_CtpC | 0.213 | 1.129 |
| H37Rv_KO_CtpD | -1.787 | -0.667 |
| H37Rv_KO_Rv1272 | 0.352 | -0.605 |
| H37Rv_KO_SugABC | -1.647 | 0.194 |
| H37Rv_KO_MbtN | -1.324 | -0.309 |
| Trans05 | 0.467 | 0.133 |
| macrophage_unactivated | -0.701 | -1.162 |
| IL1 | -0.234 | -0.009 |
| Rapamycin | -0.242 | 0.457 |
| Tcell | -0.375 | -0.358 |
| GMCSF | 0.124 | -0.29 |
| IFNab | -0.015 | -0.529 |
| IFNg | 0.088 | 0.615 |
| IFNg_GMCSF1 | -0.427 | 0.757 |
| Rv1432_day32 | 0.167 | 3.568 |
| Rv1565c_day32 | 0.06 | 0.025 |
| secA2_input | -1.007 | 0.429 |
| delta_Rv3594 | -0.922 | -0.274 |
| delta_Rv3717 | -0.615 | 0.165 |
| delta_Rv3811 | -1.096 | -0.51 |
| delta_Rv0954 | 0.447 | -0.452 |
| PonA1 | -0.152 | 0.232 |
| EccD1_KO | 0.349 | 1.033 |
| EspI_KO | 0.143 | -0.063 |
| PE35_KO | -0.175 | -0.694 |
| PPE68_KO | 0.25 | -0.541 |
| glycerol2 | -0.056 | 0.324 |
| lignocerate | -0.17 | 0.362 |
| oleate | 0.245 | -0.346 |
| phosphatidylcholine | 0.283 | 0.931 |
| acetate | -0.037 | -0.279 |
| glucAc | -0.416 | -0.143 |
| Rv0950ko | -0.202 | 1.33 |
| Rv1096ko | 0.296 | 1.607 |
| Rv3684ko | -0.02 | 2.492 |
| delta_otsA_trehalose | -0.685 | 0.252 |