Top 10 genes with highest correlation to Rv1268c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1125/- | (cc=0.5538) | info on Rv1125/- |
| Rv1419/- | (cc=0.5532) | info on Rv1419/- |
| Rv3329/- | (cc=0.501) | info on Rv3329/- |
| Rv0934/pstS1 | (cc=0.4673) | info on Rv0934/pstS1 |
| Rv1169c/lipX | (cc=0.4658) | info on Rv1169c/lipX |
| Rv0343/iniC | (cc=0.4649) | info on Rv0343/iniC |
| Rv0940c/- | (cc=0.4299) | info on Rv0940c/- |
| Rv0413/mutT3 | (cc=0.4295) | info on Rv0413/mutT3 |
| Rv3525c/- | (cc=0.4287) | info on Rv3525c/- |
| Rv3572/- | (cc=0.4278) | info on Rv3572/- |
Correlation of Rv1268c/- with Rv1125/-
Normalized LFCs for Rv1268c/-:
(description and provenance of datasets)
| Rv1268c/- | Rv1125/- | |
| Fe_supp_jason_reseq | -0.802 | -0.448 |
| low_pH_jason_reseq | 0.244 | 0.167 |
| NO_jason_reseq | 0.339 | -0.428 |
| B6_jason_reseq | -0.594 | 0.929 |
| MHCII_jason_reseq | -0.153 | 1.89 |
| Isoniazid02 | -1.286 | -1.603 |
| Rifampicin4 | -0.23 | 0.43 |
| Ethambutol3 | -1.557 | -1.75 |
| Meropenem3 | -1.628 | -1.635 |
| Vancomycin16 | -0.952 | -0.735 |
| Rv2680_day32 | -0.462 | -0.091 |
| H37Rv_KO_MarP | -0.034 | 0.879 |
| hypoxia_3wks | 0.251 | 0.443 |
| hypoxia_6wks | 0.522 | 0.34 |
| glycerol | -0.196 | 1.055 |
| cholesterol | -0.381 | -0.345 |
| AJ | 0.77 | 0.334 |
| Bibs02 | 0.925 | 0.136 |
| Bibs02c | -0.285 | 0.659 |
| BL6 | 0.18 | 0.832 |
| BL6a | 0.083 | 0.075 |
| BXD01 | -0.266 | 0.274 |
| BXD010 | -0.324 | -0.274 |
| BXD011 | 0.744 | -0.272 |
| BXD03 | -0.245 | -0.424 |
| BXD04 | -0.044 | 0.298 |
| BXD05 | 0.076 | 0.194 |
| BXD06 | 0.104 | 0.124 |
| BXD07 | -0.398 | -0.296 |
| BXD08 | -0.021 | 0.214 |
| BXD09 | -0.044 | -0.204 |
| CAST | 0.008 | -0.492 |
| CCcont | -0.866 | 0.533 |
| DS01 | -0.009 | 1.369 |
| DS02 | 0.186 | 0.685 |
| DS04 | -0.378 | 0.214 |
| DS0c | 0.291 | 1.328 |
| GP01 | -0.62 | -0.284 |
| GP02 | -1.484 | -0.635 |
| GP0c | 0.059 | -0.342 |
| NOD | 0.068 | 1.092 |
| NZO | 0.205 | -0.678 |
| PWK | 0.125 | -0.038 |
| H37Rv_KO_CtpC | 0.213 | -0.387 |
| H37Rv_KO_CtpD | -1.787 | -1.696 |
| H37Rv_KO_Rv1272 | 0.352 | 0.444 |
| H37Rv_KO_SugABC | -1.647 | -0.575 |
| H37Rv_KO_MbtN | -1.324 | -1.245 |
| Trans05 | 0.467 | 0.049 |
| macrophage_unactivated | -0.701 | 0.0 |
| IL1 | -0.234 | 0.721 |
| Rapamycin | -0.242 | 0.681 |
| Tcell | -0.375 | -1.248 |
| GMCSF | 0.124 | 1.281 |
| IFNab | -0.015 | 0.142 |
| IFNg | 0.088 | 0.307 |
| IFNg_GMCSF1 | -0.427 | 0.952 |
| Rv1432_day32 | 0.167 | 0.271 |
| Rv1565c_day32 | 0.06 | -0.398 |
| secA2_input | -1.007 | -1.288 |
| delta_Rv3594 | -0.922 | 0.698 |
| delta_Rv3717 | -0.615 | 0.101 |
| delta_Rv3811 | -1.096 | -0.403 |
| delta_Rv0954 | 0.447 | 0.053 |
| PonA1 | -0.152 | 0.0 |
| EccD1_KO | 0.349 | 1.411 |
| EspI_KO | 0.143 | 1.104 |
| PE35_KO | -0.175 | 1.129 |
| PPE68_KO | 0.25 | 0.813 |
| glycerol2 | -0.056 | 0.113 |
| lignocerate | -0.17 | 0.704 |
| oleate | 0.245 | 0.058 |
| phosphatidylcholine | 0.283 | 0.625 |
| acetate | -0.037 | 0.555 |
| glucAc | -0.416 | 0.311 |
| Rv0950ko | -0.202 | 0.793 |
| Rv1096ko | 0.296 | 0.995 |
| Rv3684ko | -0.02 | 0.632 |
| delta_otsA_trehalose | -0.685 | -0.147 |