Top 10 genes with highest correlation to Rv1265/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0936/pstA2 | (cc=0.444) | info on Rv0936/pstA2 |
| Rv2141c/- | (cc=0.4368) | info on Rv2141c/- |
| Rv0852/fadD16 | (cc=0.4105) | info on Rv0852/fadD16 |
| Rv0677c/mmpS5 | (cc=0.4023) | info on Rv0677c/mmpS5 |
| Rv3661/- | (cc=0.3938) | info on Rv3661/- |
| Rv1077/cbs | (cc=0.3895) | info on Rv1077/cbs |
| Rv0377/- | (cc=0.3866) | info on Rv0377/- |
| Rv2494/vapC38 | (cc=0.3787) | info on Rv2494/vapC38 |
| Rv2943A/- | (cc=0.3785) | info on Rv2943A/- |
| Rv3509c/ilvX | (cc=0.3774) | info on Rv3509c/ilvX |
Correlation of Rv1265/- with Rv3661/-
Normalized LFCs for Rv1265/-:
(description and provenance of datasets)
| Rv1265/- | Rv3661/- | |
| Fe_supp_jason_reseq | -0.526 | 1.727 |
| low_pH_jason_reseq | -1.163 | 0.612 |
| NO_jason_reseq | -1.481 | -0.995 |
| B6_jason_reseq | -0.429 | -0.881 |
| MHCII_jason_reseq | 0.229 | 1.179 |
| Isoniazid02 | 0.227 | 0.231 |
| Rifampicin4 | 0.617 | 0.609 |
| Ethambutol3 | -0.213 | 0.946 |
| Meropenem3 | 0.143 | 0.161 |
| Vancomycin16 | 0.512 | 0.804 |
| Rv2680_day32 | -1.833 | -1.908 |
| H37Rv_KO_MarP | 0.569 | -1.872 |
| hypoxia_3wks | -0.486 | 0.809 |
| hypoxia_6wks | -0.167 | 0.885 |
| glycerol | 0.585 | 0.815 |
| cholesterol | -0.134 | 0.931 |
| AJ | -1.435 | -0.938 |
| Bibs02 | 1.016 | 1.456 |
| Bibs02c | 1.919 | 1.475 |
| BL6 | -0.211 | 0.205 |
| BL6a | 1.322 | 0.865 |
| BXD01 | -1.307 | -0.383 |
| BXD010 | 0.161 | -0.556 |
| BXD011 | 0.789 | -1.201 |
| BXD03 | -1.357 | -1.413 |
| BXD04 | -0.241 | -0.735 |
| BXD05 | 0.142 | -1.001 |
| BXD06 | 0.575 | -0.52 |
| BXD07 | -0.973 | -0.014 |
| BXD08 | -0.72 | -0.746 |
| BXD09 | 0.283 | -0.568 |
| CAST | 0.1 | -1.76 |
| CCcont | -1.049 | 0.826 |
| DS01 | 0.602 | 1.53 |
| DS02 | -0.202 | 1.454 |
| DS04 | 0.084 | 0.994 |
| DS0c | 1.089 | 1.766 |
| GP01 | -0.935 | 0.877 |
| GP02 | -0.162 | 0.204 |
| GP0c | 0.111 | 0.359 |
| NOD | 0.369 | -1.113 |
| NZO | -1.079 | -1.221 |
| PWK | 0.207 | -1.309 |
| H37Rv_KO_CtpC | -1.072 | -0.657 |
| H37Rv_KO_CtpD | -0.551 | -0.091 |
| H37Rv_KO_Rv1272 | 0.409 | -0.309 |
| H37Rv_KO_SugABC | 1.396 | 1.375 |
| H37Rv_KO_MbtN | -0.868 | -0.726 |
| Trans05 | 0.692 | -0.094 |
| macrophage_unactivated | -0.35 | 0.369 |
| IL1 | -0.16 | -0.184 |
| Rapamycin | 0.16 | 0.43 |
| Tcell | 0.945 | -0.081 |
| GMCSF | -1.993 | -0.668 |
| IFNab | -0.698 | 0.928 |
| IFNg | 0.0 | 0.345 |
| IFNg_GMCSF1 | 0.839 | 0.0 |
| Rv1432_day32 | 0.133 | -2.066 |
| Rv1565c_day32 | 1.275 | -0.019 |
| secA2_input | 1.154 | 1.259 |
| delta_Rv3594 | 0.168 | 0.468 |
| delta_Rv3717 | 0.181 | 0.229 |
| delta_Rv3811 | 0.546 | 1.245 |
| delta_Rv0954 | 0.274 | 0.791 |
| PonA1 | -0.09 | 1.332 |
| EccD1_KO | 0.71 | -1.214 |
| EspI_KO | -0.568 | -1.198 |
| PE35_KO | 0.0 | -1.318 |
| PPE68_KO | 0.288 | -1.149 |
| glycerol2 | -1.499 | -0.9 |
| lignocerate | -0.477 | -0.821 |
| oleate | -1.323 | -1.978 |
| phosphatidylcholine | -1.307 | -0.99 |
| acetate | -0.507 | 0.0 |
| glucAc | -0.501 | 0.121 |
| Rv0950ko | 0.157 | 0.0 |
| Rv1096ko | 0.6 | 1.071 |
| Rv3684ko | 0.17 | -0.301 |
| delta_otsA_trehalose | 0.621 | 0.657 |