Top 10 genes with highest correlation to Rv1265/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0936/pstA2 | (cc=0.444) | info on Rv0936/pstA2 |
| Rv2141c/- | (cc=0.4368) | info on Rv2141c/- |
| Rv0852/fadD16 | (cc=0.4105) | info on Rv0852/fadD16 |
| Rv0677c/mmpS5 | (cc=0.4023) | info on Rv0677c/mmpS5 |
| Rv3661/- | (cc=0.3938) | info on Rv3661/- |
| Rv1077/cbs | (cc=0.3895) | info on Rv1077/cbs |
| Rv0377/- | (cc=0.3866) | info on Rv0377/- |
| Rv2494/vapC38 | (cc=0.3787) | info on Rv2494/vapC38 |
| Rv2943A/- | (cc=0.3785) | info on Rv2943A/- |
| Rv3509c/ilvX | (cc=0.3774) | info on Rv3509c/ilvX |
Correlation of Rv1265/- with Rv0852/fadD16
Normalized LFCs for Rv1265/-:
(description and provenance of datasets)
| Rv1265/- | Rv0852/fadD16 | |
| Fe_supp_jason_reseq | -0.526 | -0.617 |
| low_pH_jason_reseq | -1.163 | -0.499 |
| NO_jason_reseq | -1.481 | -0.197 |
| B6_jason_reseq | -0.429 | 0.467 |
| MHCII_jason_reseq | 0.229 | 0.671 |
| Isoniazid02 | 0.227 | -1.106 |
| Rifampicin4 | 0.617 | 0.571 |
| Ethambutol3 | -0.213 | 1.153 |
| Meropenem3 | 0.143 | 0.333 |
| Vancomycin16 | 0.512 | -0.348 |
| Rv2680_day32 | -1.833 | -0.726 |
| H37Rv_KO_MarP | 0.569 | 0.872 |
| hypoxia_3wks | -0.486 | 0.758 |
| hypoxia_6wks | -0.167 | 0.837 |
| glycerol | 0.585 | 0.0 |
| cholesterol | -0.134 | 0.244 |
| AJ | -1.435 | 0.872 |
| Bibs02 | 1.016 | 0.701 |
| Bibs02c | 1.919 | 0.502 |
| BL6 | -0.211 | -0.504 |
| BL6a | 1.322 | 0.492 |
| BXD01 | -1.307 | -0.724 |
| BXD010 | 0.161 | -1.058 |
| BXD011 | 0.789 | 0.227 |
| BXD03 | -1.357 | -0.481 |
| BXD04 | -0.241 | -0.027 |
| BXD05 | 0.142 | -0.419 |
| BXD06 | 0.575 | -0.516 |
| BXD07 | -0.973 | -0.795 |
| BXD08 | -0.72 | -0.536 |
| BXD09 | 0.283 | -0.5 |
| CAST | 0.1 | -0.234 |
| CCcont | -1.049 | -1.591 |
| DS01 | 0.602 | 0.376 |
| DS02 | -0.202 | -0.525 |
| DS04 | 0.084 | 0.465 |
| DS0c | 1.089 | -0.327 |
| GP01 | -0.935 | 0.627 |
| GP02 | -0.162 | -0.494 |
| GP0c | 0.111 | -0.18 |
| NOD | 0.369 | 0.072 |
| NZO | -1.079 | -0.9 |
| PWK | 0.207 | -0.32 |
| H37Rv_KO_CtpC | -1.072 | -0.578 |
| H37Rv_KO_CtpD | -0.551 | 0.014 |
| H37Rv_KO_Rv1272 | 0.409 | 0.338 |
| H37Rv_KO_SugABC | 1.396 | 1.581 |
| H37Rv_KO_MbtN | -0.868 | -0.877 |
| Trans05 | 0.692 | 1.035 |
| macrophage_unactivated | -0.35 | -0.691 |
| IL1 | -0.16 | -0.445 |
| Rapamycin | 0.16 | -0.896 |
| Tcell | 0.945 | -0.065 |
| GMCSF | -1.993 | -0.903 |
| IFNab | -0.698 | -0.958 |
| IFNg | 0.0 | -0.78 |
| IFNg_GMCSF1 | 0.839 | 0.707 |
| Rv1432_day32 | 0.133 | -0.266 |
| Rv1565c_day32 | 1.275 | 0.979 |
| secA2_input | 1.154 | -0.744 |
| delta_Rv3594 | 0.168 | 0.035 |
| delta_Rv3717 | 0.181 | -0.493 |
| delta_Rv3811 | 0.546 | -0.412 |
| delta_Rv0954 | 0.274 | 1.202 |
| PonA1 | -0.09 | -0.886 |
| EccD1_KO | 0.71 | 0.608 |
| EspI_KO | -0.568 | 0.274 |
| PE35_KO | 0.0 | 0.589 |
| PPE68_KO | 0.288 | 0.864 |
| glycerol2 | -1.499 | -0.125 |
| lignocerate | -0.477 | -0.307 |
| oleate | -1.323 | 0.231 |
| phosphatidylcholine | -1.307 | -0.168 |
| acetate | -0.507 | 0.0 |
| glucAc | -0.501 | -0.713 |
| Rv0950ko | 0.157 | 0.06 |
| Rv1096ko | 0.6 | 1.095 |
| Rv3684ko | 0.17 | 1.133 |
| delta_otsA_trehalose | 0.621 | -0.084 |