Top 10 genes with highest correlation to Rv1264/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0234c/gabD1 | (cc=0.4834) | info on Rv0234c/gabD1 |
| Rv3062/ligB | (cc=0.4214) | info on Rv3062/ligB |
| Rv0022c/whiB5 | (cc=0.4137) | info on Rv0022c/whiB5 |
| Rv2484c/- | (cc=0.4018) | info on Rv2484c/- |
| Rv2231A/vapC16 | (cc=0.3985) | info on Rv2231A/vapC16 |
| Rv0325/- | (cc=0.3958) | info on Rv0325/- |
| Rv0347/- | (cc=0.3847) | info on Rv0347/- |
| Rv0597c/- | (cc=0.3758) | info on Rv0597c/- |
| Rv2450c/rpfE | (cc=0.3739) | info on Rv2450c/rpfE |
| Rv1880c/cyp140 | (cc=0.3732) | info on Rv1880c/cyp140 |
Correlation of Rv1264/- with Rv0325/-
Normalized LFCs for Rv1264/-:
(description and provenance of datasets)
| Rv1264/- | Rv0325/- | |
| Fe_supp_jason_reseq | 0.076 | -0.933 |
| low_pH_jason_reseq | 0.32 | -0.1 |
| NO_jason_reseq | 0.42 | 0.459 |
| B6_jason_reseq | -0.155 | 0.812 |
| MHCII_jason_reseq | 0.409 | 0.663 |
| Isoniazid02 | 0.78 | 2.146 |
| Rifampicin4 | -0.872 | 0.0 |
| Ethambutol3 | 0.741 | 1.867 |
| Meropenem3 | -0.032 | 0.734 |
| Vancomycin16 | 0.096 | 0.196 |
| Rv2680_day32 | -0.477 | 0.179 |
| H37Rv_KO_MarP | -0.045 | 0.226 |
| hypoxia_3wks | 1.156 | 0.742 |
| hypoxia_6wks | 0.879 | 0.286 |
| glycerol | 0.161 | 0.048 |
| cholesterol | 0.0 | 0.406 |
| AJ | -0.393 | -0.04 |
| Bibs02 | 0.162 | 0.155 |
| Bibs02c | -0.738 | -0.755 |
| BL6 | 0.141 | -1.539 |
| BL6a | -0.326 | -0.966 |
| BXD01 | 0.058 | -0.567 |
| BXD010 | -0.494 | -1.32 |
| BXD011 | 0.128 | -0.328 |
| BXD03 | 0.078 | -1.245 |
| BXD04 | 0.215 | -1.3 |
| BXD05 | 0.107 | -1.341 |
| BXD06 | 0.157 | -0.854 |
| BXD07 | -0.105 | -1.477 |
| BXD08 | -0.225 | -0.473 |
| BXD09 | 0.112 | -1.507 |
| CAST | -0.305 | 0.138 |
| CCcont | -0.678 | -1.472 |
| DS01 | -0.133 | -0.151 |
| DS02 | -0.477 | -0.997 |
| DS04 | -0.551 | -0.471 |
| DS0c | -0.737 | 0.273 |
| GP01 | -0.899 | -1.378 |
| GP02 | 0.349 | -0.636 |
| GP0c | -0.426 | -0.421 |
| NOD | -0.15 | -0.099 |
| NZO | 1.058 | 0.156 |
| PWK | 0.325 | -0.004 |
| H37Rv_KO_CtpC | 0.029 | -0.961 |
| H37Rv_KO_CtpD | 0.174 | -0.729 |
| H37Rv_KO_Rv1272 | -1.015 | -1.118 |
| H37Rv_KO_SugABC | 0.403 | -0.529 |
| H37Rv_KO_MbtN | -1.507 | -0.872 |
| Trans05 | 0.434 | -0.003 |
| macrophage_unactivated | -0.335 | -0.735 |
| IL1 | 0.089 | -0.32 |
| Rapamycin | -0.267 | -0.694 |
| Tcell | 0.378 | 0.209 |
| GMCSF | -0.082 | 0.298 |
| IFNab | -0.187 | -0.263 |
| IFNg | -0.233 | -0.069 |
| IFNg_GMCSF1 | -0.154 | 0.16 |
| Rv1432_day32 | -0.454 | -0.11 |
| Rv1565c_day32 | 0.856 | 0.306 |
| secA2_input | -0.827 | -0.47 |
| delta_Rv3594 | 0.531 | -0.236 |
| delta_Rv3717 | -0.076 | 0.121 |
| delta_Rv3811 | 0.071 | 0.126 |
| delta_Rv0954 | 0.087 | 1.239 |
| PonA1 | 0.672 | 0.807 |
| EccD1_KO | 0.648 | -0.25 |
| EspI_KO | -0.65 | 0.117 |
| PE35_KO | 0.125 | -0.263 |
| PPE68_KO | -0.291 | -0.729 |
| glycerol2 | 0.455 | 0.678 |
| lignocerate | -0.138 | 0.183 |
| oleate | 0.71 | 0.872 |
| phosphatidylcholine | 0.667 | 0.657 |
| acetate | -0.738 | -0.374 |
| glucAc | -0.278 | -0.387 |
| Rv0950ko | 0.305 | 0.467 |
| Rv1096ko | 0.929 | -0.341 |
| Rv3684ko | 1.136 | -1.1 |
| delta_otsA_trehalose | 0.204 | -0.601 |