Top 10 genes with highest correlation to Rv1264/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0234c/gabD1 | (cc=0.4834) | info on Rv0234c/gabD1 |
| Rv3062/ligB | (cc=0.4214) | info on Rv3062/ligB |
| Rv0022c/whiB5 | (cc=0.4137) | info on Rv0022c/whiB5 |
| Rv2484c/- | (cc=0.4018) | info on Rv2484c/- |
| Rv2231A/vapC16 | (cc=0.3985) | info on Rv2231A/vapC16 |
| Rv0325/- | (cc=0.3958) | info on Rv0325/- |
| Rv0347/- | (cc=0.3847) | info on Rv0347/- |
| Rv0597c/- | (cc=0.3758) | info on Rv0597c/- |
| Rv2450c/rpfE | (cc=0.3739) | info on Rv2450c/rpfE |
| Rv1880c/cyp140 | (cc=0.3732) | info on Rv1880c/cyp140 |
Correlation of Rv1264/- with Rv0234c/gabD1
Normalized LFCs for Rv1264/-:
(description and provenance of datasets)
| Rv1264/- | Rv0234c/gabD1 | |
| Fe_supp_jason_reseq | 0.076 | -1.929 |
| low_pH_jason_reseq | 0.32 | -0.768 |
| NO_jason_reseq | 0.42 | -0.307 |
| B6_jason_reseq | -0.155 | -0.153 |
| MHCII_jason_reseq | 0.409 | -0.306 |
| Isoniazid02 | 0.78 | 0.664 |
| Rifampicin4 | -0.872 | 0.0 |
| Ethambutol3 | 0.741 | 0.946 |
| Meropenem3 | -0.032 | -0.21 |
| Vancomycin16 | 0.096 | 0.414 |
| Rv2680_day32 | -0.477 | -0.725 |
| H37Rv_KO_MarP | -0.045 | -0.219 |
| hypoxia_3wks | 1.156 | 0.925 |
| hypoxia_6wks | 0.879 | 1.006 |
| glycerol | 0.161 | -0.029 |
| cholesterol | 0.0 | -0.043 |
| AJ | -0.393 | -0.034 |
| Bibs02 | 0.162 | -0.856 |
| Bibs02c | -0.738 | -1.707 |
| BL6 | 0.141 | -1.383 |
| BL6a | -0.326 | -1.616 |
| BXD01 | 0.058 | -0.944 |
| BXD010 | -0.494 | -1.265 |
| BXD011 | 0.128 | -0.923 |
| BXD03 | 0.078 | -1.553 |
| BXD04 | 0.215 | -0.173 |
| BXD05 | 0.107 | -0.863 |
| BXD06 | 0.157 | -0.427 |
| BXD07 | -0.105 | -0.648 |
| BXD08 | -0.225 | -1.363 |
| BXD09 | 0.112 | -0.658 |
| CAST | -0.305 | 0.162 |
| CCcont | -0.678 | -0.066 |
| DS01 | -0.133 | -0.178 |
| DS02 | -0.477 | -0.199 |
| DS04 | -0.551 | -0.51 |
| DS0c | -0.737 | -0.233 |
| GP01 | -0.899 | -1.489 |
| GP02 | 0.349 | -0.761 |
| GP0c | -0.426 | -0.942 |
| NOD | -0.15 | -0.903 |
| NZO | 1.058 | 0.6 |
| PWK | 0.325 | -0.148 |
| H37Rv_KO_CtpC | 0.029 | -0.148 |
| H37Rv_KO_CtpD | 0.174 | -0.993 |
| H37Rv_KO_Rv1272 | -1.015 | -0.795 |
| H37Rv_KO_SugABC | 0.403 | -1.696 |
| H37Rv_KO_MbtN | -1.507 | -1.38 |
| Trans05 | 0.434 | 0.092 |
| macrophage_unactivated | -0.335 | 0.164 |
| IL1 | 0.089 | 0.077 |
| Rapamycin | -0.267 | -0.163 |
| Tcell | 0.378 | 0.485 |
| GMCSF | -0.082 | 0.0 |
| IFNab | -0.187 | 0.233 |
| IFNg | -0.233 | 0.27 |
| IFNg_GMCSF1 | -0.154 | 0.544 |
| Rv1432_day32 | -0.454 | -0.722 |
| Rv1565c_day32 | 0.856 | -0.269 |
| secA2_input | -0.827 | -0.108 |
| delta_Rv3594 | 0.531 | 0.173 |
| delta_Rv3717 | -0.076 | -1.222 |
| delta_Rv3811 | 0.071 | 0.0 |
| delta_Rv0954 | 0.087 | -0.159 |
| PonA1 | 0.672 | 0.28 |
| EccD1_KO | 0.648 | -0.155 |
| EspI_KO | -0.65 | -0.274 |
| PE35_KO | 0.125 | -0.429 |
| PPE68_KO | -0.291 | -0.387 |
| glycerol2 | 0.455 | 0.666 |
| lignocerate | -0.138 | -0.189 |
| oleate | 0.71 | 0.407 |
| phosphatidylcholine | 0.667 | -0.141 |
| acetate | -0.738 | -0.397 |
| glucAc | -0.278 | -0.507 |
| Rv0950ko | 0.305 | -0.262 |
| Rv1096ko | 0.929 | 1.378 |
| Rv3684ko | 1.136 | 0.845 |
| delta_otsA_trehalose | 0.204 | 1.239 |