Top 10 genes with highest correlation to Rv1252c/lprE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1021/- | (cc=0.5401) | info on Rv1021/- |
| Rv3670/ephE | (cc=0.4692) | info on Rv3670/ephE |
| Rv0912/- | (cc=0.458) | info on Rv0912/- |
| Rv3342/- | (cc=0.4579) | info on Rv3342/- |
| Rv3267/- | (cc=0.4498) | info on Rv3267/- |
| Rv2510c/- | (cc=0.4379) | info on Rv2510c/- |
| Rv1410c/- | (cc=0.437) | info on Rv1410c/- |
| Rv0070c/glyA2 | (cc=0.427) | info on Rv0070c/glyA2 |
| Rv2056c/rpsN2 | (cc=0.4221) | info on Rv2056c/rpsN2 |
| Rv3099c/- | (cc=0.419) | info on Rv3099c/- |
Correlation of Rv1252c/lprE with Rv3342/-
Normalized LFCs for Rv1252c/lprE:
(description and provenance of datasets)
| Rv1252c/lprE | Rv3342/- | |
| Fe_supp_jason_reseq | 0.311 | 1.233 |
| low_pH_jason_reseq | -0.753 | -0.41 |
| NO_jason_reseq | 0.231 | 0.339 |
| B6_jason_reseq | 1.197 | -0.158 |
| MHCII_jason_reseq | 0.218 | -0.735 |
| Isoniazid02 | 0.076 | 0.389 |
| Rifampicin4 | 0.249 | -0.341 |
| Ethambutol3 | -0.426 | -0.263 |
| Meropenem3 | 0.583 | -0.133 |
| Vancomycin16 | -0.202 | -0.034 |
| Rv2680_day32 | -1.24 | -1.226 |
| H37Rv_KO_MarP | -2.438 | -0.135 |
| hypoxia_3wks | 0.375 | -0.578 |
| hypoxia_6wks | 0.232 | 0.238 |
| glycerol | -2.225 | -1.609 |
| cholesterol | -1.551 | -2.277 |
| AJ | -0.622 | 0.487 |
| Bibs02 | -0.87 | -1.976 |
| Bibs02c | -1.132 | -2.89 |
| BL6 | 1.295 | -1.272 |
| BL6a | 0.314 | -0.91 |
| BXD01 | 0.822 | -0.552 |
| BXD010 | 0.581 | 0.943 |
| BXD011 | 0.773 | -0.092 |
| BXD03 | 0.332 | -0.167 |
| BXD04 | 0.297 | -0.362 |
| BXD05 | 0.481 | 0.911 |
| BXD06 | 0.558 | 0.09 |
| BXD07 | 0.756 | -0.587 |
| BXD08 | 0.276 | 0.8 |
| BXD09 | 0.539 | 0.494 |
| CAST | 0.042 | -1.615 |
| CCcont | 0.627 | 0.974 |
| DS01 | -0.351 | -1.451 |
| DS02 | 0.608 | -1.078 |
| DS04 | 0.833 | -0.29 |
| DS0c | 0.979 | -1.075 |
| GP01 | 0.867 | 1.079 |
| GP02 | 0.89 | 0.056 |
| GP0c | 0.091 | 0.765 |
| NOD | -0.955 | 0.514 |
| NZO | -0.893 | -0.584 |
| PWK | -0.324 | -0.094 |
| H37Rv_KO_CtpC | 0.606 | -0.526 |
| H37Rv_KO_CtpD | -0.188 | -1.009 |
| H37Rv_KO_Rv1272 | 0.77 | -0.866 |
| H37Rv_KO_SugABC | -0.751 | -0.231 |
| H37Rv_KO_MbtN | 0.034 | 1.222 |
| Trans05 | 0.949 | -0.423 |
| macrophage_unactivated | -0.161 | 1.382 |
| IL1 | 0.356 | 0.833 |
| Rapamycin | 0.261 | 2.24 |
| Tcell | 0.877 | -0.244 |
| GMCSF | 0.045 | 1.716 |
| IFNab | 0.523 | 1.75 |
| IFNg | 0.617 | 0.371 |
| IFNg_GMCSF1 | 1.445 | 1.502 |
| Rv1432_day32 | -0.309 | 0.149 |
| Rv1565c_day32 | -0.257 | -1.919 |
| secA2_input | 0.059 | -0.899 |
| delta_Rv3594 | -1.063 | -0.479 |
| delta_Rv3717 | -0.396 | -1.432 |
| delta_Rv3811 | -0.436 | -0.926 |
| delta_Rv0954 | -6.0 | -3.177 |
| PonA1 | -0.298 | -0.207 |
| EccD1_KO | -1.204 | -0.401 |
| EspI_KO | -1.34 | -1.868 |
| PE35_KO | 0.204 | -1.024 |
| PPE68_KO | 0.058 | -0.742 |
| glycerol2 | 0.149 | 2.311 |
| lignocerate | 0.636 | 1.982 |
| oleate | -0.102 | 0.566 |
| phosphatidylcholine | 0.665 | 0.487 |
| acetate | -0.022 | 2.198 |
| glucAc | 0.071 | 2.134 |
| Rv0950ko | -0.648 | -1.553 |
| Rv1096ko | -0.386 | -1.378 |
| Rv3684ko | -0.056 | -0.727 |
| delta_otsA_trehalose | -0.23 | -0.457 |