Top 10 genes with highest correlation to Rv1252c/lprE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1021/- | (cc=0.5401) | info on Rv1021/- |
| Rv3670/ephE | (cc=0.4692) | info on Rv3670/ephE |
| Rv0912/- | (cc=0.458) | info on Rv0912/- |
| Rv3342/- | (cc=0.4579) | info on Rv3342/- |
| Rv3267/- | (cc=0.4498) | info on Rv3267/- |
| Rv2510c/- | (cc=0.4379) | info on Rv2510c/- |
| Rv1410c/- | (cc=0.437) | info on Rv1410c/- |
| Rv0070c/glyA2 | (cc=0.427) | info on Rv0070c/glyA2 |
| Rv2056c/rpsN2 | (cc=0.4221) | info on Rv2056c/rpsN2 |
| Rv3099c/- | (cc=0.419) | info on Rv3099c/- |
Correlation of Rv1252c/lprE with Rv1410c/-
Normalized LFCs for Rv1252c/lprE:
(description and provenance of datasets)
| Rv1252c/lprE | Rv1410c/- | |
| Fe_supp_jason_reseq | 0.311 | 3.44 |
| low_pH_jason_reseq | -0.753 | 1.673 |
| NO_jason_reseq | 0.231 | -0.735 |
| B6_jason_reseq | 1.197 | 1.287 |
| MHCII_jason_reseq | 0.218 | 0.543 |
| Isoniazid02 | 0.076 | 1.099 |
| Rifampicin4 | 0.249 | -6.0 |
| Ethambutol3 | -0.426 | 0.253 |
| Meropenem3 | 0.583 | -2.427 |
| Vancomycin16 | -0.202 | -6.0 |
| Rv2680_day32 | -1.24 | -0.459 |
| H37Rv_KO_MarP | -2.438 | -4.874 |
| hypoxia_3wks | 0.375 | 0.387 |
| hypoxia_6wks | 0.232 | 0.958 |
| glycerol | -2.225 | 0.979 |
| cholesterol | -1.551 | -0.208 |
| AJ | -0.622 | -0.262 |
| Bibs02 | -0.87 | 0.23 |
| Bibs02c | -1.132 | 0.214 |
| BL6 | 1.295 | 0.727 |
| BL6a | 0.314 | 0.712 |
| BXD01 | 0.822 | 0.516 |
| BXD010 | 0.581 | -0.034 |
| BXD011 | 0.773 | 0.721 |
| BXD03 | 0.332 | 0.632 |
| BXD04 | 0.297 | 0.0 |
| BXD05 | 0.481 | 0.719 |
| BXD06 | 0.558 | 1.166 |
| BXD07 | 0.756 | 0.498 |
| BXD08 | 0.276 | 0.317 |
| BXD09 | 0.539 | 0.795 |
| CAST | 0.042 | -0.632 |
| CCcont | 0.627 | 3.121 |
| DS01 | -0.351 | -0.488 |
| DS02 | 0.608 | -0.922 |
| DS04 | 0.833 | 0.15 |
| DS0c | 0.979 | -0.671 |
| GP01 | 0.867 | 0.559 |
| GP02 | 0.89 | 0.992 |
| GP0c | 0.091 | 2.603 |
| NOD | -0.955 | -0.254 |
| NZO | -0.893 | -0.225 |
| PWK | -0.324 | -1.474 |
| H37Rv_KO_CtpC | 0.606 | -0.233 |
| H37Rv_KO_CtpD | -0.188 | -0.221 |
| H37Rv_KO_Rv1272 | 0.77 | 0.479 |
| H37Rv_KO_SugABC | -0.751 | 0.73 |
| H37Rv_KO_MbtN | 0.034 | 1.573 |
| Trans05 | 0.949 | 1.08 |
| macrophage_unactivated | -0.161 | 0.691 |
| IL1 | 0.356 | -1.154 |
| Rapamycin | 0.261 | -0.163 |
| Tcell | 0.877 | -0.74 |
| GMCSF | 0.045 | -0.288 |
| IFNab | 0.523 | 1.847 |
| IFNg | 0.617 | -0.607 |
| IFNg_GMCSF1 | 1.445 | -0.167 |
| Rv1432_day32 | -0.309 | -0.683 |
| Rv1565c_day32 | -0.257 | 0.886 |
| secA2_input | 0.059 | 1.158 |
| delta_Rv3594 | -1.063 | -6.0 |
| delta_Rv3717 | -0.396 | -5.682 |
| delta_Rv3811 | -0.436 | -6.0 |
| delta_Rv0954 | -6.0 | -6.0 |
| PonA1 | -0.298 | -6.0 |
| EccD1_KO | -1.204 | -3.039 |
| EspI_KO | -1.34 | -3.032 |
| PE35_KO | 0.204 | -2.719 |
| PPE68_KO | 0.058 | -2.198 |
| glycerol2 | 0.149 | -0.059 |
| lignocerate | 0.636 | 0.19 |
| oleate | -0.102 | -0.248 |
| phosphatidylcholine | 0.665 | -0.181 |
| acetate | -0.022 | -0.07 |
| glucAc | 0.071 | 0.236 |
| Rv0950ko | -0.648 | -0.697 |
| Rv1096ko | -0.386 | -2.009 |
| Rv3684ko | -0.056 | -0.567 |
| delta_otsA_trehalose | -0.23 | -1.379 |