Top 10 genes with highest correlation to Rv1251c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1182/papA3 | (cc=0.621) | info on Rv1182/papA3 |
| Rv0936/pstA2 | (cc=0.5548) | info on Rv0936/pstA2 |
| Rv2917/- | (cc=0.5493) | info on Rv2917/- |
| Rv1250/- | (cc=0.5489) | info on Rv1250/- |
| Rv2089c/pepE | (cc=0.5464) | info on Rv2089c/pepE |
| Rv1514c/- | (cc=0.5402) | info on Rv1514c/- |
| Rv2340c/PE_PGRS39 | (cc=0.5305) | info on Rv2340c/PE_PGRS39 |
| Rv2867c/- | (cc=0.528) | info on Rv2867c/- |
| Rv2282c/- | (cc=0.5223) | info on Rv2282c/- |
| Rv2432c/- | (cc=0.519) | info on Rv2432c/- |
Correlation of Rv1251c/- with Rv2340c/PE_PGRS39
Normalized LFCs for Rv1251c/-:
(description and provenance of datasets)
| Rv1251c/- | Rv2340c/PE_PGRS39 | |
| Fe_supp_jason_reseq | -0.343 | -0.063 |
| low_pH_jason_reseq | 0.435 | -0.452 |
| NO_jason_reseq | 0.572 | -0.417 |
| B6_jason_reseq | 0.611 | 0.657 |
| MHCII_jason_reseq | 1.169 | 0.619 |
| Isoniazid02 | 0.469 | 1.157 |
| Rifampicin4 | 0.184 | 0.485 |
| Ethambutol3 | 0.635 | 1.549 |
| Meropenem3 | 1.521 | 0.728 |
| Vancomycin16 | -0.125 | 0.061 |
| Rv2680_day32 | -0.822 | -0.465 |
| H37Rv_KO_MarP | 0.251 | -0.302 |
| hypoxia_3wks | -0.116 | -0.774 |
| hypoxia_6wks | 0.029 | -0.666 |
| glycerol | 0.418 | 0.65 |
| cholesterol | 0.343 | 0.315 |
| AJ | 0.41 | 0.565 |
| Bibs02 | 0.433 | 0.984 |
| Bibs02c | 0.541 | 0.679 |
| BL6 | 0.171 | -0.16 |
| BL6a | 0.271 | 0.014 |
| BXD01 | 0.0 | -0.58 |
| BXD010 | -0.378 | -0.687 |
| BXD011 | -0.257 | -0.737 |
| BXD03 | -0.592 | -0.566 |
| BXD04 | 0.0 | 0.035 |
| BXD05 | 0.036 | -0.068 |
| BXD06 | -0.494 | -0.939 |
| BXD07 | -0.326 | -0.624 |
| BXD08 | -0.037 | -0.277 |
| BXD09 | -0.414 | -0.626 |
| CAST | 0.143 | 0.794 |
| CCcont | -0.173 | -0.278 |
| DS01 | 0.66 | 0.956 |
| DS02 | 0.594 | 0.993 |
| DS04 | 0.762 | 0.45 |
| DS0c | 0.561 | 0.94 |
| GP01 | -0.221 | -0.24 |
| GP02 | -0.889 | 0.643 |
| GP0c | -0.464 | -0.111 |
| NOD | 0.159 | -0.218 |
| NZO | 0.399 | 0.48 |
| PWK | 0.392 | 0.672 |
| H37Rv_KO_CtpC | -0.076 | -0.891 |
| H37Rv_KO_CtpD | -0.608 | -0.009 |
| H37Rv_KO_Rv1272 | -0.135 | 0.232 |
| H37Rv_KO_SugABC | 0.592 | 0.386 |
| H37Rv_KO_MbtN | 0.174 | 0.239 |
| Trans05 | 0.0 | 0.28 |
| macrophage_unactivated | -0.309 | -1.004 |
| IL1 | -0.193 | -0.736 |
| Rapamycin | -0.049 | -0.62 |
| Tcell | -0.052 | -0.978 |
| GMCSF | 0.203 | -0.747 |
| IFNab | -0.508 | -0.429 |
| IFNg | -0.043 | -0.526 |
| IFNg_GMCSF1 | -0.258 | -0.154 |
| Rv1432_day32 | 0.0 | 0.352 |
| Rv1565c_day32 | 0.635 | 0.051 |
| secA2_input | -0.348 | 0.512 |
| delta_Rv3594 | 0.162 | -0.207 |
| delta_Rv3717 | 0.277 | -0.44 |
| delta_Rv3811 | 0.106 | -0.007 |
| delta_Rv0954 | -0.147 | 0.172 |
| PonA1 | -0.178 | -0.128 |
| EccD1_KO | 0.97 | 0.697 |
| EspI_KO | 0.633 | 0.211 |
| PE35_KO | 0.368 | 0.117 |
| PPE68_KO | 0.653 | 0.038 |
| glycerol2 | -0.126 | -0.041 |
| lignocerate | 0.213 | 0.516 |
| oleate | -0.264 | 0.0 |
| phosphatidylcholine | 0.167 | 0.494 |
| acetate | 0.02 | 0.116 |
| glucAc | 0.012 | 0.086 |
| Rv0950ko | -0.772 | 0.555 |
| Rv1096ko | 0.0 | -0.537 |
| Rv3684ko | -0.432 | -0.442 |
| delta_otsA_trehalose | -0.232 | -0.722 |