Top 10 genes with highest correlation to Rv1251c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1182/papA3 | (cc=0.621) | info on Rv1182/papA3 |
| Rv0936/pstA2 | (cc=0.5548) | info on Rv0936/pstA2 |
| Rv2917/- | (cc=0.5493) | info on Rv2917/- |
| Rv1250/- | (cc=0.5489) | info on Rv1250/- |
| Rv2089c/pepE | (cc=0.5464) | info on Rv2089c/pepE |
| Rv1514c/- | (cc=0.5402) | info on Rv1514c/- |
| Rv2340c/PE_PGRS39 | (cc=0.5305) | info on Rv2340c/PE_PGRS39 |
| Rv2867c/- | (cc=0.528) | info on Rv2867c/- |
| Rv2282c/- | (cc=0.5223) | info on Rv2282c/- |
| Rv2432c/- | (cc=0.519) | info on Rv2432c/- |
Correlation of Rv1251c/- with Rv2089c/pepE
Normalized LFCs for Rv1251c/-:
(description and provenance of datasets)
| Rv1251c/- | Rv2089c/pepE | |
| Fe_supp_jason_reseq | -0.343 | 0.813 |
| low_pH_jason_reseq | 0.435 | -0.179 |
| NO_jason_reseq | 0.572 | 0.622 |
| B6_jason_reseq | 0.611 | 0.61 |
| MHCII_jason_reseq | 1.169 | 0.0 |
| Isoniazid02 | 0.469 | 0.973 |
| Rifampicin4 | 0.184 | 0.0 |
| Ethambutol3 | 0.635 | 3.413 |
| Meropenem3 | 1.521 | 2.671 |
| Vancomycin16 | -0.125 | 0.796 |
| Rv2680_day32 | -0.822 | -0.471 |
| H37Rv_KO_MarP | 0.251 | -0.785 |
| hypoxia_3wks | -0.116 | 0.136 |
| hypoxia_6wks | 0.029 | 0.702 |
| glycerol | 0.418 | -0.089 |
| cholesterol | 0.343 | 0.627 |
| AJ | 0.41 | 0.131 |
| Bibs02 | 0.433 | 0.51 |
| Bibs02c | 0.541 | 0.784 |
| BL6 | 0.171 | 0.589 |
| BL6a | 0.271 | -0.181 |
| BXD01 | 0.0 | -1.104 |
| BXD010 | -0.378 | -0.435 |
| BXD011 | -0.257 | -1.578 |
| BXD03 | -0.592 | -1.883 |
| BXD04 | 0.0 | -1.268 |
| BXD05 | 0.036 | -0.758 |
| BXD06 | -0.494 | -1.269 |
| BXD07 | -0.326 | -0.338 |
| BXD08 | -0.037 | -1.042 |
| BXD09 | -0.414 | -0.863 |
| CAST | 0.143 | 0.162 |
| CCcont | -0.173 | -0.997 |
| DS01 | 0.66 | 0.409 |
| DS02 | 0.594 | -0.065 |
| DS04 | 0.762 | -0.438 |
| DS0c | 0.561 | 0.506 |
| GP01 | -0.221 | -0.44 |
| GP02 | -0.889 | -1.364 |
| GP0c | -0.464 | -1.19 |
| NOD | 0.159 | 0.576 |
| NZO | 0.399 | 0.37 |
| PWK | 0.392 | 0.388 |
| H37Rv_KO_CtpC | -0.076 | -1.486 |
| H37Rv_KO_CtpD | -0.608 | 0.435 |
| H37Rv_KO_Rv1272 | -0.135 | -0.76 |
| H37Rv_KO_SugABC | 0.592 | 0.588 |
| H37Rv_KO_MbtN | 0.174 | -1.38 |
| Trans05 | 0.0 | -0.183 |
| macrophage_unactivated | -0.309 | -0.641 |
| IL1 | -0.193 | -0.217 |
| Rapamycin | -0.049 | -1.249 |
| Tcell | -0.052 | -1.03 |
| GMCSF | 0.203 | 0.0 |
| IFNab | -0.508 | -0.296 |
| IFNg | -0.043 | -0.262 |
| IFNg_GMCSF1 | -0.258 | -0.553 |
| Rv1432_day32 | 0.0 | -0.24 |
| Rv1565c_day32 | 0.635 | 0.496 |
| secA2_input | -0.348 | 1.188 |
| delta_Rv3594 | 0.162 | 1.634 |
| delta_Rv3717 | 0.277 | 0.594 |
| delta_Rv3811 | 0.106 | 1.866 |
| delta_Rv0954 | -0.147 | 0.0 |
| PonA1 | -0.178 | 0.728 |
| EccD1_KO | 0.97 | 0.51 |
| EspI_KO | 0.633 | 1.343 |
| PE35_KO | 0.368 | 0.621 |
| PPE68_KO | 0.653 | 1.731 |
| glycerol2 | -0.126 | -1.131 |
| lignocerate | 0.213 | -1.047 |
| oleate | -0.264 | -0.872 |
| phosphatidylcholine | 0.167 | -0.798 |
| acetate | 0.02 | -0.487 |
| glucAc | 0.012 | -0.229 |
| Rv0950ko | -0.772 | -0.347 |
| Rv1096ko | 0.0 | -0.259 |
| Rv3684ko | -0.432 | -0.282 |
| delta_otsA_trehalose | -0.232 | -1.358 |