Top 10 genes with highest correlation to Rv1216c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0766c/cyp123 | (cc=0.5294) | info on Rv0766c/cyp123 |
| Rv3126c/- | (cc=0.4932) | info on Rv3126c/- |
| Rv1752/- | (cc=0.492) | info on Rv1752/- |
| Rv1662/pks8 | (cc=0.4874) | info on Rv1662/pks8 |
| Rv0845/- | (cc=0.4807) | info on Rv0845/- |
| Rv1505c/- | (cc=0.4663) | info on Rv1505c/- |
| Rv1116/- | (cc=0.4654) | info on Rv1116/- |
| Rv3770B/- | (cc=0.4515) | info on Rv3770B/- |
| Rv1430/PE16 | (cc=0.4508) | info on Rv1430/PE16 |
| Rv0799c/- | (cc=0.4469) | info on Rv0799c/- |
Correlation of Rv1216c/- with Rv1116/-
Normalized LFCs for Rv1216c/-:
(description and provenance of datasets)
| Rv1216c/- | Rv1116/- | |
| Fe_supp_jason_reseq | 0.101 | -0.079 |
| low_pH_jason_reseq | 0.253 | 1.563 |
| NO_jason_reseq | -0.307 | -0.937 |
| B6_jason_reseq | -0.659 | -0.775 |
| MHCII_jason_reseq | -0.196 | -2.185 |
| Isoniazid02 | 0.012 | -0.202 |
| Rifampicin4 | -0.211 | -0.793 |
| Ethambutol3 | -0.242 | -0.469 |
| Meropenem3 | -0.083 | -0.329 |
| Vancomycin16 | 0.021 | -0.544 |
| Rv2680_day32 | -0.377 | -3.002 |
| H37Rv_KO_MarP | 0.577 | 0.209 |
| hypoxia_3wks | 0.255 | 0.881 |
| hypoxia_6wks | -0.244 | 0.315 |
| glycerol | -0.43 | -2.319 |
| cholesterol | -0.6 | -1.265 |
| AJ | 0.506 | -0.866 |
| Bibs02 | 1.037 | -0.507 |
| Bibs02c | -0.247 | 1.479 |
| BL6 | 0.758 | 1.089 |
| BL6a | 0.096 | 3.068 |
| BXD01 | 0.725 | 1.975 |
| BXD010 | 0.655 | 3.315 |
| BXD011 | 0.271 | 2.491 |
| BXD03 | 0.861 | 2.737 |
| BXD04 | 0.706 | 2.569 |
| BXD05 | 0.231 | 2.73 |
| BXD06 | 0.703 | 2.452 |
| BXD07 | 0.729 | 2.972 |
| BXD08 | 0.754 | 2.685 |
| BXD09 | 0.602 | 2.084 |
| CAST | 0.455 | -0.859 |
| CCcont | 0.435 | 1.588 |
| DS01 | 0.38 | -0.352 |
| DS02 | -0.318 | -2.497 |
| DS04 | 0.645 | -1.405 |
| DS0c | 0.473 | -1.425 |
| GP01 | 0.527 | 2.097 |
| GP02 | -0.244 | -0.353 |
| GP0c | -0.257 | 2.178 |
| NOD | 0.612 | -0.623 |
| NZO | -0.038 | -2.29 |
| PWK | 0.22 | -1.563 |
| H37Rv_KO_CtpC | -0.192 | 3.593 |
| H37Rv_KO_CtpD | 0.327 | 1.121 |
| H37Rv_KO_Rv1272 | -0.045 | 1.482 |
| H37Rv_KO_SugABC | -0.219 | -0.321 |
| H37Rv_KO_MbtN | 1.059 | 1.349 |
| Trans05 | -0.239 | 1.761 |
| macrophage_unactivated | 0.152 | -1.727 |
| IL1 | 0.062 | -1.216 |
| Rapamycin | 0.27 | -0.414 |
| Tcell | 0.756 | -1.606 |
| GMCSF | 0.232 | -0.38 |
| IFNab | -0.063 | -0.46 |
| IFNg | 0.075 | -1.646 |
| IFNg_GMCSF1 | -0.066 | -0.723 |
| Rv1432_day32 | -0.053 | 0.0 |
| Rv1565c_day32 | -0.175 | -0.622 |
| secA2_input | -0.153 | 0.092 |
| delta_Rv3594 | 0.266 | -2.284 |
| delta_Rv3717 | -0.145 | -0.364 |
| delta_Rv3811 | -0.013 | 0.213 |
| delta_Rv0954 | -0.176 | -1.87 |
| PonA1 | -0.953 | -3.333 |
| EccD1_KO | 0.395 | 0.51 |
| EspI_KO | 0.425 | 1.934 |
| PE35_KO | 0.405 | 0.796 |
| PPE68_KO | 0.909 | 1.523 |
| glycerol2 | 0.0 | -1.516 |
| lignocerate | -0.502 | -1.445 |
| oleate | 0.449 | -0.045 |
| phosphatidylcholine | 0.262 | -0.403 |
| acetate | -0.598 | -1.837 |
| glucAc | -0.607 | -2.853 |
| Rv0950ko | 0.051 | 1.263 |
| Rv1096ko | 0.232 | 0.989 |
| Rv3684ko | -0.206 | 0.095 |
| delta_otsA_trehalose | -1.034 | 0.483 |