Top 10 genes with highest correlation to Rv1190/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2208/cobS | (cc=0.5103) | info on Rv2208/cobS |
| Rv0590A/- | (cc=0.4855) | info on Rv0590A/- |
| Rv3353c/- | (cc=0.4852) | info on Rv3353c/- |
| Rv2281/pitB | (cc=0.4847) | info on Rv2281/pitB |
| Rv0906/- | (cc=0.4783) | info on Rv0906/- |
| Rv0376c/- | (cc=0.4777) | info on Rv0376c/- |
| Rv2237/- | (cc=0.4768) | info on Rv2237/- |
| Rv0278c/PE_PGRS3 | (cc=0.4717) | info on Rv0278c/PE_PGRS3 |
| Rv3335c/- | (cc=0.4683) | info on Rv3335c/- |
| Rv0488/- | (cc=0.4605) | info on Rv0488/- |
Correlation of Rv1190/- with Rv0376c/-
Normalized LFCs for Rv1190/-:
(description and provenance of datasets)
| Rv1190/- | Rv0376c/- | |
| Fe_supp_jason_reseq | -0.126 | -0.63 |
| low_pH_jason_reseq | 0.037 | -1.325 |
| NO_jason_reseq | 1.105 | -0.795 |
| B6_jason_reseq | 0.834 | -0.028 |
| MHCII_jason_reseq | -0.149 | -0.012 |
| Isoniazid02 | -1.247 | -0.518 |
| Rifampicin4 | -0.29 | 0.208 |
| Ethambutol3 | -1.002 | -0.411 |
| Meropenem3 | -0.712 | 0.008 |
| Vancomycin16 | -0.679 | -0.175 |
| Rv2680_day32 | 0.752 | -0.134 |
| H37Rv_KO_MarP | -0.317 | 0.415 |
| hypoxia_3wks | -0.881 | -0.223 |
| hypoxia_6wks | 0.461 | 0.524 |
| glycerol | 1.062 | 0.607 |
| cholesterol | 0.753 | 0.238 |
| AJ | 0.376 | 0.481 |
| Bibs02 | 1.127 | 0.706 |
| Bibs02c | 1.664 | 0.252 |
| BL6 | -0.075 | 0.311 |
| BL6a | 1.167 | -0.139 |
| BXD01 | -0.025 | -0.309 |
| BXD010 | 0.768 | -0.717 |
| BXD011 | 0.037 | -0.695 |
| BXD03 | 0.429 | -0.49 |
| BXD04 | 0.428 | -0.39 |
| BXD05 | 0.942 | 0.655 |
| BXD06 | 0.543 | -0.868 |
| BXD07 | 0.336 | -0.735 |
| BXD08 | 0.281 | -0.706 |
| BXD09 | 0.581 | -0.982 |
| CAST | 0.152 | 0.242 |
| CCcont | 0.029 | -0.752 |
| DS01 | 0.833 | 0.828 |
| DS02 | 0.706 | 1.15 |
| DS04 | 0.559 | -0.32 |
| DS0c | 0.476 | 0.812 |
| GP01 | 0.855 | 0.081 |
| GP02 | -0.595 | -0.097 |
| GP0c | 0.285 | -0.41 |
| NOD | 0.439 | 0.418 |
| NZO | -0.315 | -0.432 |
| PWK | -0.223 | -0.102 |
| H37Rv_KO_CtpC | 0.806 | -0.352 |
| H37Rv_KO_CtpD | -0.32 | -0.691 |
| H37Rv_KO_Rv1272 | 0.156 | -0.81 |
| H37Rv_KO_SugABC | -1.388 | -1.064 |
| H37Rv_KO_MbtN | 0.087 | -0.756 |
| Trans05 | 1.051 | 0.167 |
| macrophage_unactivated | 0.824 | -1.234 |
| IL1 | -0.845 | -0.632 |
| Rapamycin | 0.328 | -0.786 |
| Tcell | -1.196 | -0.495 |
| GMCSF | 0.731 | -0.454 |
| IFNab | -0.862 | -1.327 |
| IFNg | -0.099 | -0.684 |
| IFNg_GMCSF1 | -0.179 | -1.084 |
| Rv1432_day32 | 0.627 | -0.481 |
| Rv1565c_day32 | -1.022 | 0.676 |
| secA2_input | 0.719 | 1.061 |
| delta_Rv3594 | 0.13 | -0.159 |
| delta_Rv3717 | 1.62 | 0.292 |
| delta_Rv3811 | 1.096 | 0.449 |
| delta_Rv0954 | 1.052 | 0.425 |
| PonA1 | 1.545 | 1.338 |
| EccD1_KO | -0.214 | -0.947 |
| EspI_KO | 0.211 | -0.097 |
| PE35_KO | 0.388 | -0.382 |
| PPE68_KO | -0.793 | -0.419 |
| glycerol2 | 1.618 | 0.395 |
| lignocerate | 2.3 | 0.958 |
| oleate | 0.091 | 0.432 |
| phosphatidylcholine | 1.795 | 0.64 |
| acetate | 2.241 | 0.826 |
| glucAc | 1.897 | 0.974 |
| Rv0950ko | -0.401 | 1.505 |
| Rv1096ko | 1.65 | 1.972 |
| Rv3684ko | 0.4 | 2.06 |
| delta_otsA_trehalose | -1.378 | -1.522 |