Top 10 genes with highest correlation to Rv1190/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2208/cobS | (cc=0.5103) | info on Rv2208/cobS |
| Rv0590A/- | (cc=0.4855) | info on Rv0590A/- |
| Rv3353c/- | (cc=0.4852) | info on Rv3353c/- |
| Rv2281/pitB | (cc=0.4847) | info on Rv2281/pitB |
| Rv0906/- | (cc=0.4783) | info on Rv0906/- |
| Rv0376c/- | (cc=0.4777) | info on Rv0376c/- |
| Rv2237/- | (cc=0.4768) | info on Rv2237/- |
| Rv0278c/PE_PGRS3 | (cc=0.4717) | info on Rv0278c/PE_PGRS3 |
| Rv3335c/- | (cc=0.4683) | info on Rv3335c/- |
| Rv0488/- | (cc=0.4605) | info on Rv0488/- |
Correlation of Rv1190/- with Rv2208/cobS
Normalized LFCs for Rv1190/-:
(description and provenance of datasets)
| Rv1190/- | Rv2208/cobS | |
| Fe_supp_jason_reseq | -0.126 | 0.991 |
| low_pH_jason_reseq | 0.037 | -0.136 |
| NO_jason_reseq | 1.105 | -1.113 |
| B6_jason_reseq | 0.834 | -0.591 |
| MHCII_jason_reseq | -0.149 | -0.163 |
| Isoniazid02 | -1.247 | -1.937 |
| Rifampicin4 | -0.29 | -1.359 |
| Ethambutol3 | -1.002 | -2.013 |
| Meropenem3 | -0.712 | -2.443 |
| Vancomycin16 | -0.679 | -1.846 |
| Rv2680_day32 | 0.752 | -0.208 |
| H37Rv_KO_MarP | -0.317 | 0.104 |
| hypoxia_3wks | -0.881 | -0.666 |
| hypoxia_6wks | 0.461 | -1.631 |
| glycerol | 1.062 | 1.29 |
| cholesterol | 0.753 | 0.356 |
| AJ | 0.376 | 1.05 |
| Bibs02 | 1.127 | 0.813 |
| Bibs02c | 1.664 | 0.788 |
| BL6 | -0.075 | 0.32 |
| BL6a | 1.167 | -0.05 |
| BXD01 | -0.025 | -0.745 |
| BXD010 | 0.768 | -0.118 |
| BXD011 | 0.037 | -1.076 |
| BXD03 | 0.429 | -1.031 |
| BXD04 | 0.428 | -0.486 |
| BXD05 | 0.942 | -1.745 |
| BXD06 | 0.543 | -0.363 |
| BXD07 | 0.336 | -0.544 |
| BXD08 | 0.281 | -0.677 |
| BXD09 | 0.581 | -0.716 |
| CAST | 0.152 | -0.781 |
| CCcont | 0.029 | 0.055 |
| DS01 | 0.833 | 0.556 |
| DS02 | 0.706 | 0.307 |
| DS04 | 0.559 | 1.016 |
| DS0c | 0.476 | -0.892 |
| GP01 | 0.855 | -0.443 |
| GP02 | -0.595 | -1.282 |
| GP0c | 0.285 | 0.28 |
| NOD | 0.439 | -0.334 |
| NZO | -0.315 | 0.146 |
| PWK | -0.223 | 0.402 |
| H37Rv_KO_CtpC | 0.806 | 1.197 |
| H37Rv_KO_CtpD | -0.32 | -1.952 |
| H37Rv_KO_Rv1272 | 0.156 | -0.936 |
| H37Rv_KO_SugABC | -1.388 | 0.084 |
| H37Rv_KO_MbtN | 0.087 | 0.594 |
| Trans05 | 1.051 | -2.013 |
| macrophage_unactivated | 0.824 | -1.989 |
| IL1 | -0.845 | -0.955 |
| Rapamycin | 0.328 | -0.43 |
| Tcell | -1.196 | -0.958 |
| GMCSF | 0.731 | -1.486 |
| IFNab | -0.862 | -0.067 |
| IFNg | -0.099 | -1.593 |
| IFNg_GMCSF1 | -0.179 | 0.399 |
| Rv1432_day32 | 0.627 | 0.608 |
| Rv1565c_day32 | -1.022 | -0.218 |
| secA2_input | 0.719 | -0.704 |
| delta_Rv3594 | 0.13 | 1.019 |
| delta_Rv3717 | 1.62 | 1.136 |
| delta_Rv3811 | 1.096 | 0.807 |
| delta_Rv0954 | 1.052 | 0.04 |
| PonA1 | 1.545 | 0.963 |
| EccD1_KO | -0.214 | -0.257 |
| EspI_KO | 0.211 | -0.411 |
| PE35_KO | 0.388 | -0.995 |
| PPE68_KO | -0.793 | -0.793 |
| glycerol2 | 1.618 | 1.359 |
| lignocerate | 2.3 | 2.322 |
| oleate | 0.091 | 1.375 |
| phosphatidylcholine | 1.795 | 2.274 |
| acetate | 2.241 | 2.462 |
| glucAc | 1.897 | 2.004 |
| Rv0950ko | -0.401 | -0.513 |
| Rv1096ko | 1.65 | 1.161 |
| Rv3684ko | 0.4 | 0.783 |
| delta_otsA_trehalose | -1.378 | 0.778 |