Top 10 genes with highest correlation to Rv1186c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0887c/- | (cc=0.5907) | info on Rv0887c/- |
| Rv3468c/- | (cc=0.5674) | info on Rv3468c/- |
| Rv0396/- | (cc=0.5266) | info on Rv0396/- |
| Rv0616A/vapB29 | (cc=0.5238) | info on Rv0616A/vapB29 |
| Rv0664/vapB8 | (cc=0.5209) | info on Rv0664/vapB8 |
| Rv2638/- | (cc=0.5179) | info on Rv2638/- |
| Rv0089/- | (cc=0.5174) | info on Rv0089/- |
| Rv0312/- | (cc=0.5116) | info on Rv0312/- |
| Rv0570/nrdZ | (cc=0.5047) | info on Rv0570/nrdZ |
| Rv0442c/PPE10 | (cc=0.5046) | info on Rv0442c/PPE10 |
Correlation of Rv1186c/- with Rv0616A/vapB29
Normalized LFCs for Rv1186c/-:
(description and provenance of datasets)
| Rv1186c/- | Rv0616A/vapB29 | |
| Fe_supp_jason_reseq | 0.111 | 0.635 |
| low_pH_jason_reseq | -0.254 | -1.066 |
| NO_jason_reseq | 1.895 | -1.089 |
| B6_jason_reseq | 0.388 | 0.057 |
| MHCII_jason_reseq | 0.789 | 1.027 |
| Isoniazid02 | -0.549 | -0.53 |
| Rifampicin4 | -0.544 | -2.708 |
| Ethambutol3 | -0.413 | -1.721 |
| Meropenem3 | -0.718 | -1.538 |
| Vancomycin16 | -0.279 | -1.287 |
| Rv2680_day32 | 0.788 | 0.473 |
| H37Rv_KO_MarP | 0.35 | 0.299 |
| hypoxia_3wks | -0.849 | -2.165 |
| hypoxia_6wks | 0.058 | -1.036 |
| glycerol | -1.24 | -0.796 |
| cholesterol | -0.221 | -0.783 |
| AJ | -0.03 | -1.309 |
| Bibs02 | 0.244 | -0.564 |
| Bibs02c | -0.62 | -0.059 |
| BL6 | 0.123 | 0.71 |
| BL6a | -0.132 | -1.231 |
| BXD01 | -0.259 | -3.352 |
| BXD010 | -0.88 | -2.113 |
| BXD011 | -0.565 | -1.331 |
| BXD03 | -0.831 | -1.267 |
| BXD04 | -1.16 | -2.682 |
| BXD05 | 0.018 | -0.441 |
| BXD06 | -0.419 | -2.329 |
| BXD07 | -0.13 | -2.639 |
| BXD08 | 0.451 | -1.06 |
| BXD09 | -0.93 | -2.72 |
| CAST | -0.122 | 1.89 |
| CCcont | 0.019 | -1.299 |
| DS01 | -0.91 | -0.881 |
| DS02 | -0.572 | 0.375 |
| DS04 | 0.639 | -2.35 |
| DS0c | -0.877 | -1.958 |
| GP01 | 0.05 | -2.932 |
| GP02 | -0.592 | -0.706 |
| GP0c | -0.385 | -1.83 |
| NOD | -0.628 | 0.182 |
| NZO | -0.246 | -0.666 |
| PWK | 0.171 | -0.372 |
| H37Rv_KO_CtpC | -0.427 | -1.466 |
| H37Rv_KO_CtpD | -2.323 | -3.192 |
| H37Rv_KO_Rv1272 | -0.866 | -3.483 |
| H37Rv_KO_SugABC | 0.498 | -0.939 |
| H37Rv_KO_MbtN | -2.057 | -1.432 |
| Trans05 | -1.034 | -0.916 |
| macrophage_unactivated | -0.243 | -2.007 |
| IL1 | -0.469 | -1.323 |
| Rapamycin | -0.657 | -1.765 |
| Tcell | 0.16 | -1.32 |
| GMCSF | -0.272 | 0.306 |
| IFNab | -0.735 | -0.837 |
| IFNg | 0.992 | 0.134 |
| IFNg_GMCSF1 | -0.408 | -1.313 |
| Rv1432_day32 | -0.456 | -0.475 |
| Rv1565c_day32 | 0.703 | 0.265 |
| secA2_input | -0.977 | -1.853 |
| delta_Rv3594 | -0.324 | 0.702 |
| delta_Rv3717 | 0.593 | 0.405 |
| delta_Rv3811 | 0.593 | 1.939 |
| delta_Rv0954 | 0.416 | 1.799 |
| PonA1 | 0.931 | 2.649 |
| EccD1_KO | -1.059 | 0.194 |
| EspI_KO | -0.918 | -2.073 |
| PE35_KO | -0.601 | -2.121 |
| PPE68_KO | -0.934 | -1.078 |
| glycerol2 | 1.019 | 0.0 |
| lignocerate | 1.738 | 1.61 |
| oleate | -1.805 | 0.196 |
| phosphatidylcholine | 1.179 | 0.531 |
| acetate | 1.822 | 2.382 |
| glucAc | 1.816 | 2.569 |
| Rv0950ko | 0.54 | -2.053 |
| Rv1096ko | 1.019 | -0.648 |
| Rv3684ko | 1.703 | -1.87 |
| delta_otsA_trehalose | 1.111 | 2.222 |