Top 10 genes with highest correlation to Rv1186c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0887c/- | (cc=0.5907) | info on Rv0887c/- |
| Rv3468c/- | (cc=0.5674) | info on Rv3468c/- |
| Rv0396/- | (cc=0.5266) | info on Rv0396/- |
| Rv0616A/vapB29 | (cc=0.5238) | info on Rv0616A/vapB29 |
| Rv0664/vapB8 | (cc=0.5209) | info on Rv0664/vapB8 |
| Rv2638/- | (cc=0.5179) | info on Rv2638/- |
| Rv0089/- | (cc=0.5174) | info on Rv0089/- |
| Rv0312/- | (cc=0.5116) | info on Rv0312/- |
| Rv0570/nrdZ | (cc=0.5047) | info on Rv0570/nrdZ |
| Rv0442c/PPE10 | (cc=0.5046) | info on Rv0442c/PPE10 |
Correlation of Rv1186c/- with Rv0396/-
Normalized LFCs for Rv1186c/-:
(description and provenance of datasets)
| Rv1186c/- | Rv0396/- | |
| Fe_supp_jason_reseq | 0.111 | -1.018 |
| low_pH_jason_reseq | -0.254 | -0.512 |
| NO_jason_reseq | 1.895 | 0.0 |
| B6_jason_reseq | 0.388 | -0.679 |
| MHCII_jason_reseq | 0.789 | 0.783 |
| Isoniazid02 | -0.549 | -0.074 |
| Rifampicin4 | -0.544 | 0.311 |
| Ethambutol3 | -0.413 | 0.218 |
| Meropenem3 | -0.718 | 0.204 |
| Vancomycin16 | -0.279 | 0.427 |
| Rv2680_day32 | 0.788 | -1.194 |
| H37Rv_KO_MarP | 0.35 | -0.031 |
| hypoxia_3wks | -0.849 | -0.112 |
| hypoxia_6wks | 0.058 | -0.643 |
| glycerol | -1.24 | -2.992 |
| cholesterol | -0.221 | -1.623 |
| AJ | -0.03 | -0.165 |
| Bibs02 | 0.244 | 0.162 |
| Bibs02c | -0.62 | 0.717 |
| BL6 | 0.123 | -1.678 |
| BL6a | -0.132 | -1.111 |
| BXD01 | -0.259 | -2.09 |
| BXD010 | -0.88 | 0.323 |
| BXD011 | -0.565 | -1.109 |
| BXD03 | -0.831 | -1.796 |
| BXD04 | -1.16 | -2.419 |
| BXD05 | 0.018 | -0.557 |
| BXD06 | -0.419 | -0.233 |
| BXD07 | -0.13 | -1.014 |
| BXD08 | 0.451 | -1.97 |
| BXD09 | -0.93 | -0.848 |
| CAST | -0.122 | 0.537 |
| CCcont | 0.019 | -1.983 |
| DS01 | -0.91 | -0.39 |
| DS02 | -0.572 | -0.654 |
| DS04 | 0.639 | 0.538 |
| DS0c | -0.877 | 0.27 |
| GP01 | 0.05 | -1.743 |
| GP02 | -0.592 | -1.383 |
| GP0c | -0.385 | -1.412 |
| NOD | -0.628 | 0.329 |
| NZO | -0.246 | 0.0 |
| PWK | 0.171 | 0.872 |
| H37Rv_KO_CtpC | -0.427 | -0.98 |
| H37Rv_KO_CtpD | -2.323 | -2.545 |
| H37Rv_KO_Rv1272 | -0.866 | 0.491 |
| H37Rv_KO_SugABC | 0.498 | -1.11 |
| H37Rv_KO_MbtN | -2.057 | -1.051 |
| Trans05 | -1.034 | 0.758 |
| macrophage_unactivated | -0.243 | -0.972 |
| IL1 | -0.469 | -0.507 |
| Rapamycin | -0.657 | 0.242 |
| Tcell | 0.16 | -1.095 |
| GMCSF | -0.272 | -0.927 |
| IFNab | -0.735 | -1.732 |
| IFNg | 0.992 | 0.436 |
| IFNg_GMCSF1 | -0.408 | -0.496 |
| Rv1432_day32 | -0.456 | -0.016 |
| Rv1565c_day32 | 0.703 | 2.267 |
| secA2_input | -0.977 | -0.725 |
| delta_Rv3594 | -0.324 | -0.052 |
| delta_Rv3717 | 0.593 | -0.088 |
| delta_Rv3811 | 0.593 | -0.479 |
| delta_Rv0954 | 0.416 | 0.394 |
| PonA1 | 0.931 | 0.601 |
| EccD1_KO | -1.059 | -0.773 |
| EspI_KO | -0.918 | -0.074 |
| PE35_KO | -0.601 | 0.324 |
| PPE68_KO | -0.934 | -0.384 |
| glycerol2 | 1.019 | 1.233 |
| lignocerate | 1.738 | 1.287 |
| oleate | -1.805 | -1.337 |
| phosphatidylcholine | 1.179 | 1.0 |
| acetate | 1.822 | 2.73 |
| glucAc | 1.816 | 1.378 |
| Rv0950ko | 0.54 | 1.173 |
| Rv1096ko | 1.019 | 1.695 |
| Rv3684ko | 1.703 | 1.143 |
| delta_otsA_trehalose | 1.111 | -0.15 |