Top 10 genes with highest correlation to Rv1165/typA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3920c/- | (cc=0.5499) | info on Rv3920c/- |
| Rv2983/- | (cc=0.535) | info on Rv2983/- |
| Rv3041c/- | (cc=0.5266) | info on Rv3041c/- |
| Rv2125/- | (cc=0.5228) | info on Rv2125/- |
| Rv2831/echA16 | (cc=0.5129) | info on Rv2831/echA16 |
| Rv2404c/lepA | (cc=0.4708) | info on Rv2404c/lepA |
| Rv2672/- | (cc=0.4557) | info on Rv2672/- |
| Rv3557c/- | (cc=0.4503) | info on Rv3557c/- |
| Rv3228/- | (cc=0.4443) | info on Rv3228/- |
| Rv2733c/- | (cc=0.4418) | info on Rv2733c/- |
Correlation of Rv1165/typA with Rv2404c/lepA
Normalized LFCs for Rv1165/typA:
(description and provenance of datasets)
| Rv1165/typA | Rv2404c/lepA | |
| Fe_supp_jason_reseq | -0.191 | 0.598 |
| low_pH_jason_reseq | -0.015 | -1.467 |
| NO_jason_reseq | 0.764 | 2.108 |
| B6_jason_reseq | 0.078 | 0.881 |
| MHCII_jason_reseq | 0.896 | -0.098 |
| Isoniazid02 | 1.302 | 5.905 |
| Rifampicin4 | 0.818 | 1.597 |
| Ethambutol3 | 0.083 | 1.79 |
| Meropenem3 | -0.504 | 0.264 |
| Vancomycin16 | 0.825 | 0.846 |
| Rv2680_day32 | -0.932 | -0.613 |
| H37Rv_KO_MarP | 1.116 | 1.555 |
| hypoxia_3wks | 0.108 | -3.274 |
| hypoxia_6wks | -0.958 | -3.802 |
| glycerol | 1.033 | 1.044 |
| cholesterol | -0.015 | -0.171 |
| AJ | 0.182 | -0.41 |
| Bibs02 | -0.568 | -1.46 |
| Bibs02c | -0.382 | -0.94 |
| BL6 | -0.653 | -1.237 |
| BL6a | -0.397 | 0.098 |
| BXD01 | -0.344 | -1.128 |
| BXD010 | -0.13 | 0.312 |
| BXD011 | -0.136 | 0.269 |
| BXD03 | -0.861 | 0.192 |
| BXD04 | 0.392 | -0.987 |
| BXD05 | -0.455 | 0.654 |
| BXD06 | -0.26 | 1.065 |
| BXD07 | -0.509 | 0.068 |
| BXD08 | 0.097 | 0.04 |
| BXD09 | -0.408 | -0.265 |
| CAST | -0.462 | -1.146 |
| CCcont | -0.281 | 0.0 |
| DS01 | 0.397 | -1.461 |
| DS02 | -0.282 | -2.658 |
| DS04 | -0.09 | -0.698 |
| DS0c | 0.086 | -1.422 |
| GP01 | -0.355 | -0.384 |
| GP02 | 0.033 | -0.867 |
| GP0c | -0.301 | -0.506 |
| NOD | -0.89 | -0.023 |
| NZO | -0.821 | -0.928 |
| PWK | 0.438 | -1.324 |
| H37Rv_KO_CtpC | -0.297 | -1.832 |
| H37Rv_KO_CtpD | -0.201 | -0.957 |
| H37Rv_KO_Rv1272 | -0.601 | -0.3 |
| H37Rv_KO_SugABC | 0.2 | -0.073 |
| H37Rv_KO_MbtN | 1.249 | 0.832 |
| Trans05 | -0.38 | -1.161 |
| macrophage_unactivated | 0.025 | 0.451 |
| IL1 | 0.154 | 0.249 |
| Rapamycin | 0.092 | 0.319 |
| Tcell | 0.049 | 0.068 |
| GMCSF | 0.309 | 0.816 |
| IFNab | 0.248 | -0.408 |
| IFNg | 0.198 | 0.224 |
| IFNg_GMCSF1 | 0.025 | 0.327 |
| Rv1432_day32 | -0.841 | 0.824 |
| Rv1565c_day32 | 0.308 | -2.443 |
| secA2_input | 0.045 | -0.542 |
| delta_Rv3594 | 0.75 | 3.552 |
| delta_Rv3717 | 0.43 | 4.823 |
| delta_Rv3811 | 0.886 | 2.528 |
| delta_Rv0954 | 0.373 | 3.693 |
| PonA1 | 0.738 | 0.0 |
| EccD1_KO | -0.056 | 0.056 |
| EspI_KO | 0.26 | 0.816 |
| PE35_KO | 0.359 | 0.298 |
| PPE68_KO | -0.029 | 0.915 |
| glycerol2 | -1.391 | -0.094 |
| lignocerate | -0.374 | -1.316 |
| oleate | -1.202 | -0.703 |
| phosphatidylcholine | -0.462 | -1.192 |
| acetate | -0.387 | -0.111 |
| glucAc | -0.062 | -0.084 |
| Rv0950ko | -0.075 | 0.651 |
| Rv1096ko | 0.386 | -0.19 |
| Rv3684ko | -0.4 | 1.002 |
| delta_otsA_trehalose | 0.429 | -0.866 |