Top 10 genes with highest correlation to Rv1159/pimE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2553c/- | (cc=0.6549) | info on Rv2553c/- |
| Rv1836c/- | (cc=0.6473) | info on Rv1836c/- |
| Rv3207c/- | (cc=0.6403) | info on Rv3207c/- |
| Rv0050/ponA1 | (cc=0.6319) | info on Rv0050/ponA1 |
| Rv2051c/ppm1 | (cc=0.6218) | info on Rv2051c/ppm1 |
| Rv1821/secA2 | (cc=0.6034) | info on Rv1821/secA2 |
| Rv3101c/ftsX | (cc=0.576) | info on Rv3101c/ftsX |
| Rv2861c/mapB | (cc=0.5752) | info on Rv2861c/mapB |
| Rv3671c/- | (cc=0.5699) | info on Rv3671c/- |
| Rv1566c/- | (cc=0.5584) | info on Rv1566c/- |
Correlation of Rv1159/pimE with Rv1836c/-
Normalized LFCs for Rv1159/pimE:
(description and provenance of datasets)
| Rv1159/pimE | Rv1836c/- | |
| Fe_supp_jason_reseq | 3.157 | 3.703 |
| low_pH_jason_reseq | -1.517 | -0.44 |
| NO_jason_reseq | -1.352 | -0.69 |
| B6_jason_reseq | -0.909 | -0.292 |
| MHCII_jason_reseq | -0.8 | 0.492 |
| Isoniazid02 | -1.81 | -2.187 |
| Rifampicin4 | -2.794 | -2.943 |
| Ethambutol3 | -1.423 | -1.216 |
| Meropenem3 | -0.247 | -1.533 |
| Vancomycin16 | -3.507 | -2.653 |
| Rv2680_day32 | -2.003 | 1.226 |
| H37Rv_KO_MarP | -5.778 | -6.0 |
| hypoxia_3wks | 0.0 | -0.961 |
| hypoxia_6wks | -0.223 | -0.503 |
| glycerol | 1.255 | -0.202 |
| cholesterol | 0.482 | 0.253 |
| AJ | 0.0 | -0.232 |
| Bibs02 | 1.264 | -0.183 |
| Bibs02c | -0.629 | -0.209 |
| BL6 | 0.0 | 1.02 |
| BL6a | 0.125 | 1.339 |
| BXD01 | -0.283 | 1.272 |
| BXD010 | -0.179 | 0.323 |
| BXD011 | 0.594 | 1.988 |
| BXD03 | -0.189 | 0.341 |
| BXD04 | -0.372 | 0.563 |
| BXD05 | 0.682 | 1.21 |
| BXD06 | 0.084 | 0.523 |
| BXD07 | 0.861 | 0.865 |
| BXD08 | -0.4 | 1.248 |
| BXD09 | -0.196 | 0.95 |
| CAST | -0.692 | 0.21 |
| CCcont | 2.281 | 2.888 |
| DS01 | 0.671 | -0.236 |
| DS02 | -0.304 | -0.217 |
| DS04 | -0.422 | 0.883 |
| DS0c | 0.267 | 0.0 |
| GP01 | -0.215 | 0.964 |
| GP02 | 1.848 | 1.165 |
| GP0c | 0.808 | 1.002 |
| NOD | -0.314 | -0.225 |
| NZO | 0.663 | -0.199 |
| PWK | -0.274 | -0.196 |
| H37Rv_KO_CtpC | 1.01 | 0.739 |
| H37Rv_KO_CtpD | 0.537 | 0.918 |
| H37Rv_KO_Rv1272 | -0.306 | 0.953 |
| H37Rv_KO_SugABC | -0.298 | 1.362 |
| H37Rv_KO_MbtN | 0.903 | 1.116 |
| Trans05 | 1.144 | 1.066 |
| macrophage_unactivated | 0.42 | 0.669 |
| IL1 | 0.756 | 0.0 |
| Rapamycin | 0.902 | 0.227 |
| Tcell | 1.955 | 0.0 |
| GMCSF | -0.525 | 0.38 |
| IFNab | -0.29 | 1.844 |
| IFNg | 0.682 | 1.058 |
| IFNg_GMCSF1 | -0.302 | 0.452 |
| Rv1432_day32 | -2.654 | 1.748 |
| Rv1565c_day32 | -0.381 | 0.0 |
| secA2_input | -1.741 | -2.174 |
| delta_Rv3594 | 0.34 | 2.695 |
| delta_Rv3717 | -1.067 | 3.555 |
| delta_Rv3811 | -0.54 | 2.842 |
| delta_Rv0954 | -0.469 | -1.461 |
| PonA1 | 0.256 | -1.387 |
| EccD1_KO | -0.059 | 0.148 |
| EspI_KO | -0.257 | -0.051 |
| PE35_KO | -2.412 | -1.496 |
| PPE68_KO | 0.083 | 0.0 |
| glycerol2 | -1.316 | -0.193 |
| lignocerate | -1.296 | -0.168 |
| oleate | -1.704 | -0.196 |
| phosphatidylcholine | -1.49 | -0.193 |
| acetate | 0.866 | 0.0 |
| glucAc | -0.285 | -0.143 |
| Rv0950ko | -3.474 | -6.0 |
| Rv1096ko | 0.763 | -0.03 |
| Rv3684ko | 1.673 | 1.677 |
| delta_otsA_trehalose | 0.829 | -0.288 |