Top 10 genes with highest correlation to Rv1145/mmpL13a:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1378c/- | (cc=0.5497) | info on Rv1378c/- |
| Rv2351c/plcA | (cc=0.4939) | info on Rv2351c/plcA |
| Rv2958c/- | (cc=0.4846) | info on Rv2958c/- |
| Rv1004c/- | (cc=0.4832) | info on Rv1004c/- |
| Rv3056/dinP | (cc=0.4763) | info on Rv3056/dinP |
| Rv0610c/- | (cc=0.4738) | info on Rv0610c/- |
| Rv2016/- | (cc=0.4635) | info on Rv2016/- |
| Rv0764c/cyp51 | (cc=0.4601) | info on Rv0764c/cyp51 |
| Rv3018c/PPE46 | (cc=0.4591) | info on Rv3018c/PPE46 |
| Rv2910c/- | (cc=0.4587) | info on Rv2910c/- |
Correlation of Rv1145/mmpL13a with Rv2910c/-
Normalized LFCs for Rv1145/mmpL13a:
(description and provenance of datasets)
| Rv1145/mmpL13a | Rv2910c/- | |
| Fe_supp_jason_reseq | 1.17 | 0.275 |
| low_pH_jason_reseq | -0.962 | -0.967 |
| NO_jason_reseq | -0.648 | 0.137 |
| B6_jason_reseq | 0.054 | 0.127 |
| MHCII_jason_reseq | 0.472 | 1.187 |
| Isoniazid02 | 0.327 | 0.841 |
| Rifampicin4 | 0.0 | 0.203 |
| Ethambutol3 | 2.5 | 0.951 |
| Meropenem3 | 0.218 | 1.054 |
| Vancomycin16 | 0.483 | 0.761 |
| Rv2680_day32 | -1.101 | -0.397 |
| H37Rv_KO_MarP | 0.82 | 1.229 |
| hypoxia_3wks | 0.092 | 0.738 |
| hypoxia_6wks | -0.578 | -0.66 |
| glycerol | -0.385 | -0.434 |
| cholesterol | -0.63 | 0.521 |
| AJ | 0.193 | -0.039 |
| Bibs02 | 0.478 | 0.931 |
| Bibs02c | 0.708 | 1.206 |
| BL6 | -0.888 | -0.485 |
| BL6a | -0.118 | 0.367 |
| BXD01 | -0.404 | 0.121 |
| BXD010 | -1.107 | -0.096 |
| BXD011 | -0.923 | -0.555 |
| BXD03 | 0.201 | 0.373 |
| BXD04 | 0.372 | 1.308 |
| BXD05 | -0.615 | -1.224 |
| BXD06 | -0.414 | -0.172 |
| BXD07 | -1.044 | -0.784 |
| BXD08 | 0.831 | -0.564 |
| BXD09 | -0.28 | -0.169 |
| CAST | -0.399 | 0.018 |
| CCcont | -0.538 | 0.024 |
| DS01 | 0.291 | 0.469 |
| DS02 | 0.666 | 1.204 |
| DS04 | 0.822 | 0.278 |
| DS0c | 1.081 | 0.25 |
| GP01 | -0.462 | -1.505 |
| GP02 | 1.14 | -0.46 |
| GP0c | 0.273 | -0.229 |
| NOD | 0.348 | -0.417 |
| NZO | -0.134 | 0.5 |
| PWK | 0.352 | 0.695 |
| H37Rv_KO_CtpC | 0.673 | -1.19 |
| H37Rv_KO_CtpD | 2.037 | 0.533 |
| H37Rv_KO_Rv1272 | 0.432 | -0.144 |
| H37Rv_KO_SugABC | 0.591 | -0.174 |
| H37Rv_KO_MbtN | 0.0 | 0.902 |
| Trans05 | -1.315 | -0.979 |
| macrophage_unactivated | -0.597 | -0.139 |
| IL1 | -1.7 | -0.602 |
| Rapamycin | -0.5 | -0.135 |
| Tcell | -0.531 | 0.046 |
| GMCSF | -0.758 | -0.364 |
| IFNab | -1.626 | -0.986 |
| IFNg | -0.652 | -1.392 |
| IFNg_GMCSF1 | 0.424 | -0.434 |
| Rv1432_day32 | 0.021 | -0.464 |
| Rv1565c_day32 | 0.43 | -0.019 |
| secA2_input | -2.465 | 0.131 |
| delta_Rv3594 | -0.063 | -0.22 |
| delta_Rv3717 | -0.172 | -0.011 |
| delta_Rv3811 | 0.012 | -0.14 |
| delta_Rv0954 | 0.209 | 0.158 |
| PonA1 | 0.679 | -0.286 |
| EccD1_KO | -0.704 | -0.691 |
| EspI_KO | -0.057 | -0.288 |
| PE35_KO | -0.149 | 0.306 |
| PPE68_KO | 0.064 | -0.25 |
| glycerol2 | 0.015 | 0.188 |
| lignocerate | 0.283 | 0.045 |
| oleate | 0.234 | -0.394 |
| phosphatidylcholine | 0.522 | -0.027 |
| acetate | 0.053 | 0.293 |
| glucAc | 0.22 | -0.09 |
| Rv0950ko | 0.262 | 0.259 |
| Rv1096ko | 0.229 | -0.926 |
| Rv3684ko | 0.0 | -0.065 |
| delta_otsA_trehalose | -0.546 | -0.447 |