Top 10 genes with highest correlation to Rv1134/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2792c/- | (cc=0.4668) | info on Rv2792c/- |
| Rv0642c/mmaA4 | (cc=0.4534) | info on Rv0642c/mmaA4 |
| Rv2161c/- | (cc=0.437) | info on Rv2161c/- |
| Rv2655c/- | (cc=0.4283) | info on Rv2655c/- |
| Rv1116/- | (cc=0.4247) | info on Rv1116/- |
| Rv1960c/parD1 | (cc=0.4214) | info on Rv1960c/parD1 |
| Rv2071c/cobM | (cc=0.4211) | info on Rv2071c/cobM |
| Rv0279c/PE_PGRS4 | (cc=0.4163) | info on Rv0279c/PE_PGRS4 |
| Rv2510c/- | (cc=0.4157) | info on Rv2510c/- |
| Rv2735c/- | (cc=0.4154) | info on Rv2735c/- |
Correlation of Rv1134/- with Rv2071c/cobM
Normalized LFCs for Rv1134/-:
(description and provenance of datasets)
| Rv1134/- | Rv2071c/cobM | |
| Fe_supp_jason_reseq | -0.077 | -0.581 |
| low_pH_jason_reseq | -1.077 | -0.599 |
| NO_jason_reseq | 0.407 | -0.084 |
| B6_jason_reseq | -1.197 | -1.398 |
| MHCII_jason_reseq | 0.046 | -1.519 |
| Isoniazid02 | 0.57 | 1.014 |
| Rifampicin4 | 0.141 | 0.143 |
| Ethambutol3 | 0.349 | 1.172 |
| Meropenem3 | 0.738 | 0.476 |
| Vancomycin16 | 0.138 | 0.093 |
| Rv2680_day32 | 0.07 | 1.19 |
| H37Rv_KO_MarP | 0.255 | -0.128 |
| hypoxia_3wks | -0.447 | -0.343 |
| hypoxia_6wks | 0.545 | -0.447 |
| glycerol | 1.415 | 1.027 |
| cholesterol | -0.346 | 0.585 |
| AJ | 1.16 | -0.113 |
| Bibs02 | -0.669 | 0.102 |
| Bibs02c | 0.767 | -0.186 |
| BL6 | -0.318 | 0.405 |
| BL6a | 0.776 | 0.0 |
| BXD01 | 0.376 | 0.632 |
| BXD010 | 1.085 | 0.254 |
| BXD011 | 0.655 | 0.312 |
| BXD03 | 0.031 | 0.3 |
| BXD04 | -0.538 | 0.524 |
| BXD05 | 1.922 | 0.145 |
| BXD06 | 0.587 | 0.376 |
| BXD07 | 0.662 | 0.468 |
| BXD08 | 1.047 | 0.899 |
| BXD09 | 0.287 | 0.354 |
| CAST | 0.21 | -0.135 |
| CCcont | 0.069 | 0.852 |
| DS01 | 0.163 | -0.091 |
| DS02 | -0.132 | -0.106 |
| DS04 | 0.791 | -0.319 |
| DS0c | -0.869 | -0.083 |
| GP01 | 1.044 | 1.257 |
| GP02 | 0.0 | 1.231 |
| GP0c | 0.351 | 1.225 |
| NOD | 0.13 | 1.355 |
| NZO | -0.334 | -0.488 |
| PWK | -0.412 | 0.091 |
| H37Rv_KO_CtpC | 0.425 | 0.105 |
| H37Rv_KO_CtpD | -0.622 | 0.936 |
| H37Rv_KO_Rv1272 | 1.842 | 0.693 |
| H37Rv_KO_SugABC | -1.587 | 1.0 |
| H37Rv_KO_MbtN | 0.8 | 0.85 |
| Trans05 | 1.49 | 0.57 |
| macrophage_unactivated | -1.24 | -0.874 |
| IL1 | 0.065 | -0.575 |
| Rapamycin | -0.31 | -0.255 |
| Tcell | -1.248 | -1.15 |
| GMCSF | -0.62 | -0.364 |
| IFNab | -0.16 | -0.218 |
| IFNg | -0.82 | -0.74 |
| IFNg_GMCSF1 | -0.217 | -0.097 |
| Rv1432_day32 | 0.361 | -0.297 |
| Rv1565c_day32 | -1.496 | -0.032 |
| secA2_input | 1.434 | 0.888 |
| delta_Rv3594 | -0.569 | -0.459 |
| delta_Rv3717 | -0.282 | -0.237 |
| delta_Rv3811 | -0.132 | -0.373 |
| delta_Rv0954 | -0.08 | -0.377 |
| PonA1 | -0.711 | -0.735 |
| EccD1_KO | -0.151 | -0.674 |
| EspI_KO | 0.22 | -0.282 |
| PE35_KO | -0.645 | 0.216 |
| PPE68_KO | 0.144 | -0.093 |
| glycerol2 | -0.594 | 0.242 |
| lignocerate | -0.979 | 0.261 |
| oleate | 0.675 | 0.333 |
| phosphatidylcholine | -0.619 | 0.466 |
| acetate | -0.735 | -0.18 |
| glucAc | -0.653 | 0.0 |
| Rv0950ko | 0.247 | 0.121 |
| Rv1096ko | -0.54 | -0.881 |
| Rv3684ko | -1.729 | -0.757 |
| delta_otsA_trehalose | 1.005 | 0.164 |