Top 10 genes with highest correlation to Rv1108c/xseA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0333/- | (cc=0.5402) | info on Rv0333/- |
| Rv2859c/- | (cc=0.5154) | info on Rv2859c/- |
| Rv2623/TB31.7 | (cc=0.4939) | info on Rv2623/TB31.7 |
| Rv2599/- | (cc=0.4926) | info on Rv2599/- |
| Rv3310/sapM | (cc=0.4825) | info on Rv3310/sapM |
| Rv2101/helZ | (cc=0.4734) | info on Rv2101/helZ |
| Rv2306B/- | (cc=0.473) | info on Rv2306B/- |
| Rv0577/TB27.3 | (cc=0.466) | info on Rv0577/TB27.3 |
| Rv0889c/citA | (cc=0.4509) | info on Rv0889c/citA |
| Rv1974/- | (cc=0.4488) | info on Rv1974/- |
Correlation of Rv1108c/xseA with Rv2599/-
Normalized LFCs for Rv1108c/xseA:
(description and provenance of datasets)
| Rv1108c/xseA | Rv2599/- | |
| Fe_supp_jason_reseq | -0.232 | -0.624 |
| low_pH_jason_reseq | -0.865 | -0.591 |
| NO_jason_reseq | -0.714 | 0.06 |
| B6_jason_reseq | 0.051 | 0.422 |
| MHCII_jason_reseq | 1.169 | 0.753 |
| Isoniazid02 | 0.112 | 0.084 |
| Rifampicin4 | -0.03 | 0.073 |
| Ethambutol3 | 0.146 | 0.151 |
| Meropenem3 | 3.205 | 0.258 |
| Vancomycin16 | 0.401 | -0.117 |
| Rv2680_day32 | 0.792 | 0.236 |
| H37Rv_KO_MarP | -0.964 | 0.044 |
| hypoxia_3wks | -0.642 | -0.231 |
| hypoxia_6wks | -0.058 | 0.013 |
| glycerol | 0.155 | -0.006 |
| cholesterol | -0.047 | -0.125 |
| AJ | -1.227 | -0.148 |
| Bibs02 | -0.991 | -0.044 |
| Bibs02c | -0.703 | 0.488 |
| BL6 | 0.03 | -0.456 |
| BL6a | -0.56 | -0.042 |
| BXD01 | -0.76 | -0.697 |
| BXD010 | -1.023 | -0.068 |
| BXD011 | 0.189 | 0.149 |
| BXD03 | -0.769 | -0.468 |
| BXD04 | -1.146 | -0.786 |
| BXD05 | -0.233 | -0.15 |
| BXD06 | -0.231 | -0.578 |
| BXD07 | -0.227 | -0.276 |
| BXD08 | 0.179 | -0.838 |
| BXD09 | -0.154 | -0.512 |
| CAST | -0.172 | -0.359 |
| CCcont | -0.569 | -0.439 |
| DS01 | -0.077 | 0.125 |
| DS02 | 0.085 | -0.017 |
| DS04 | -0.488 | 0.219 |
| DS0c | 0.052 | 0.289 |
| GP01 | -1.795 | -0.736 |
| GP02 | 0.706 | 0.344 |
| GP0c | -0.213 | -1.293 |
| NOD | -0.054 | 0.519 |
| NZO | -0.977 | 0.101 |
| PWK | -0.396 | -0.752 |
| H37Rv_KO_CtpC | -0.221 | 0.379 |
| H37Rv_KO_CtpD | -1.302 | -0.695 |
| H37Rv_KO_Rv1272 | -2.383 | -0.767 |
| H37Rv_KO_SugABC | 0.276 | 0.892 |
| H37Rv_KO_MbtN | -0.259 | -0.721 |
| Trans05 | -0.468 | -0.132 |
| macrophage_unactivated | -0.66 | -1.158 |
| IL1 | -0.946 | -1.24 |
| Rapamycin | 0.138 | -1.007 |
| Tcell | 0.0 | -0.762 |
| GMCSF | -0.185 | -0.222 |
| IFNab | 0.269 | -0.707 |
| IFNg | -0.454 | 0.168 |
| IFNg_GMCSF1 | -0.148 | -0.123 |
| Rv1432_day32 | -0.149 | 0.488 |
| Rv1565c_day32 | -0.381 | 0.534 |
| secA2_input | 0.698 | 0.49 |
| delta_Rv3594 | 0.262 | 0.39 |
| delta_Rv3717 | -0.664 | -0.141 |
| delta_Rv3811 | 0.057 | 0.41 |
| delta_Rv0954 | -0.195 | 0.376 |
| PonA1 | -0.061 | 0.489 |
| EccD1_KO | 0.664 | 0.964 |
| EspI_KO | 1.041 | 1.529 |
| PE35_KO | 0.974 | 1.52 |
| PPE68_KO | 1.677 | 0.989 |
| glycerol2 | -0.092 | 0.217 |
| lignocerate | 0.438 | 0.488 |
| oleate | -0.907 | -0.133 |
| phosphatidylcholine | -0.513 | 0.36 |
| acetate | -0.037 | 0.477 |
| glucAc | 0.753 | 0.722 |
| Rv0950ko | -0.745 | 0.648 |
| Rv1096ko | -0.558 | 0.507 |
| Rv3684ko | 0.458 | -0.072 |
| delta_otsA_trehalose | -0.463 | -0.837 |