Top 10 genes with highest correlation to Rv1108c/xseA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0333/- | (cc=0.5402) | info on Rv0333/- |
| Rv2859c/- | (cc=0.5154) | info on Rv2859c/- |
| Rv2623/TB31.7 | (cc=0.4939) | info on Rv2623/TB31.7 |
| Rv2599/- | (cc=0.4926) | info on Rv2599/- |
| Rv3310/sapM | (cc=0.4825) | info on Rv3310/sapM |
| Rv2101/helZ | (cc=0.4734) | info on Rv2101/helZ |
| Rv2306B/- | (cc=0.473) | info on Rv2306B/- |
| Rv0577/TB27.3 | (cc=0.466) | info on Rv0577/TB27.3 |
| Rv0889c/citA | (cc=0.4509) | info on Rv0889c/citA |
| Rv1974/- | (cc=0.4488) | info on Rv1974/- |
Correlation of Rv1108c/xseA with Rv0333/-
Normalized LFCs for Rv1108c/xseA:
(description and provenance of datasets)
| Rv1108c/xseA | Rv0333/- | |
| Fe_supp_jason_reseq | -0.232 | 0.118 |
| low_pH_jason_reseq | -0.865 | -1.261 |
| NO_jason_reseq | -0.714 | -0.389 |
| B6_jason_reseq | 0.051 | 1.124 |
| MHCII_jason_reseq | 1.169 | 0.143 |
| Isoniazid02 | 0.112 | 1.398 |
| Rifampicin4 | -0.03 | -0.853 |
| Ethambutol3 | 0.146 | 1.0 |
| Meropenem3 | 3.205 | 4.998 |
| Vancomycin16 | 0.401 | -0.048 |
| Rv2680_day32 | 0.792 | 0.23 |
| H37Rv_KO_MarP | -0.964 | -0.896 |
| hypoxia_3wks | -0.642 | -0.203 |
| hypoxia_6wks | -0.058 | 0.282 |
| glycerol | 0.155 | -0.622 |
| cholesterol | -0.047 | 0.222 |
| AJ | -1.227 | -0.419 |
| Bibs02 | -0.991 | 1.237 |
| Bibs02c | -0.703 | -0.105 |
| BL6 | 0.03 | 0.642 |
| BL6a | -0.56 | -0.313 |
| BXD01 | -0.76 | -1.937 |
| BXD010 | -1.023 | -2.664 |
| BXD011 | 0.189 | -0.342 |
| BXD03 | -0.769 | -1.814 |
| BXD04 | -1.146 | -0.905 |
| BXD05 | -0.233 | -0.167 |
| BXD06 | -0.231 | -0.678 |
| BXD07 | -0.227 | -0.613 |
| BXD08 | 0.179 | 0.204 |
| BXD09 | -0.154 | -1.128 |
| CAST | -0.172 | -0.746 |
| CCcont | -0.569 | -0.891 |
| DS01 | -0.077 | 0.121 |
| DS02 | 0.085 | -0.269 |
| DS04 | -0.488 | 0.842 |
| DS0c | 0.052 | -0.49 |
| GP01 | -1.795 | -0.205 |
| GP02 | 0.706 | 0.563 |
| GP0c | -0.213 | -0.613 |
| NOD | -0.054 | -0.249 |
| NZO | -0.977 | 0.426 |
| PWK | -0.396 | 0.776 |
| H37Rv_KO_CtpC | -0.221 | 0.201 |
| H37Rv_KO_CtpD | -1.302 | -2.441 |
| H37Rv_KO_Rv1272 | -2.383 | -1.764 |
| H37Rv_KO_SugABC | 0.276 | 0.934 |
| H37Rv_KO_MbtN | -0.259 | -2.144 |
| Trans05 | -0.468 | -0.917 |
| macrophage_unactivated | -0.66 | 0.186 |
| IL1 | -0.946 | 0.905 |
| Rapamycin | 0.138 | 1.01 |
| Tcell | 0.0 | -0.951 |
| GMCSF | -0.185 | 0.673 |
| IFNab | 0.269 | 0.2 |
| IFNg | -0.454 | 0.492 |
| IFNg_GMCSF1 | -0.148 | -0.047 |
| Rv1432_day32 | -0.149 | 2.117 |
| Rv1565c_day32 | -0.381 | 0.006 |
| secA2_input | 0.698 | 0.485 |
| delta_Rv3594 | 0.262 | -2.109 |
| delta_Rv3717 | -0.664 | -1.453 |
| delta_Rv3811 | 0.057 | -0.995 |
| delta_Rv0954 | -0.195 | -1.093 |
| PonA1 | -0.061 | -0.723 |
| EccD1_KO | 0.664 | 0.569 |
| EspI_KO | 1.041 | 1.554 |
| PE35_KO | 0.974 | -0.359 |
| PPE68_KO | 1.677 | 0.797 |
| glycerol2 | -0.092 | -0.59 |
| lignocerate | 0.438 | -0.022 |
| oleate | -0.907 | 0.051 |
| phosphatidylcholine | -0.513 | 0.148 |
| acetate | -0.037 | 1.303 |
| glucAc | 0.753 | -0.314 |
| Rv0950ko | -0.745 | 0.181 |
| Rv1096ko | -0.558 | 0.884 |
| Rv3684ko | 0.458 | 0.842 |
| delta_otsA_trehalose | -0.463 | -1.479 |