Top 10 genes with highest correlation to Rv1086/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1836c/- | (cc=0.6417) | info on Rv1836c/- |
| Rv1821/secA2 | (cc=0.5927) | info on Rv1821/secA2 |
| Rv2553c/- | (cc=0.5752) | info on Rv2553c/- |
| Rv3101c/ftsX | (cc=0.5733) | info on Rv3101c/ftsX |
| Rv2166c/- | (cc=0.5564) | info on Rv2166c/- |
| Rv3207c/- | (cc=0.5466) | info on Rv3207c/- |
| Rv2224c/caeA | (cc=0.539) | info on Rv2224c/caeA |
| Rv3671c/- | (cc=0.5219) | info on Rv3671c/- |
| Rv3810/pirG | (cc=0.5199) | info on Rv3810/pirG |
| Rv2507/- | (cc=0.5187) | info on Rv2507/- |
Correlation of Rv1086/- with Rv3810/pirG
Normalized LFCs for Rv1086/-:
(description and provenance of datasets)
| Rv1086/- | Rv3810/pirG | |
| Fe_supp_jason_reseq | -0.508 | 0.253 |
| low_pH_jason_reseq | 0.694 | -0.842 |
| NO_jason_reseq | -0.845 | -1.32 |
| B6_jason_reseq | -0.649 | -0.85 |
| MHCII_jason_reseq | -0.572 | -0.614 |
| Isoniazid02 | -0.281 | 0.469 |
| Rifampicin4 | -1.836 | -4.703 |
| Ethambutol3 | -0.505 | -1.131 |
| Meropenem3 | -0.648 | -0.386 |
| Vancomycin16 | -1.799 | -4.019 |
| Rv2680_day32 | -0.239 | -0.947 |
| H37Rv_KO_MarP | -2.368 | -0.734 |
| hypoxia_3wks | -2.568 | -4.175 |
| hypoxia_6wks | -0.672 | -2.859 |
| glycerol | -0.654 | 1.147 |
| cholesterol | 1.367 | 1.797 |
| AJ | -0.983 | -0.983 |
| Bibs02 | -0.775 | 0.976 |
| Bibs02c | -0.887 | 0.805 |
| BL6 | -0.53 | -0.768 |
| BL6a | -0.839 | -1.019 |
| BXD01 | -0.552 | -0.67 |
| BXD010 | -0.543 | -0.787 |
| BXD011 | -0.54 | -0.782 |
| BXD03 | -0.315 | -0.573 |
| BXD04 | -0.4 | -0.236 |
| BXD05 | -0.57 | -0.827 |
| BXD06 | -0.566 | -0.687 |
| BXD07 | -0.587 | -0.851 |
| BXD08 | -0.564 | -0.817 |
| BXD09 | -0.596 | -0.863 |
| CAST | -0.976 | -0.782 |
| CCcont | 2.055 | 1.43 |
| DS01 | -1.001 | 0.133 |
| DS02 | -0.922 | 0.922 |
| DS04 | -0.141 | 1.405 |
| DS0c | -0.919 | 0.239 |
| GP01 | -0.418 | 1.26 |
| GP02 | -0.353 | -0.353 |
| GP0c | -0.303 | 0.446 |
| NOD | -0.952 | -0.763 |
| NZO | -0.845 | -1.225 |
| PWK | -0.831 | -1.205 |
| H37Rv_KO_CtpC | -0.242 | 0.341 |
| H37Rv_KO_CtpD | -0.092 | 0.072 |
| H37Rv_KO_Rv1272 | -0.598 | -0.598 |
| H37Rv_KO_SugABC | 0.245 | 1.297 |
| H37Rv_KO_MbtN | 0.069 | -0.271 |
| Trans05 | -0.554 | -0.161 |
| macrophage_unactivated | -0.638 | 0.0 |
| IL1 | -1.05 | -0.374 |
| Rapamycin | -0.402 | -0.387 |
| Tcell | 0.0 | -0.411 |
| GMCSF | -0.346 | -0.694 |
| IFNab | 0.363 | 0.0 |
| IFNg | 0.163 | -0.337 |
| IFNg_GMCSF1 | -0.635 | 0.0 |
| Rv1432_day32 | -0.18 | 0.314 |
| Rv1565c_day32 | -0.766 | -0.325 |
| secA2_input | -4.12 | -1.154 |
| delta_Rv3594 | 1.277 | 2.674 |
| delta_Rv3717 | 2.139 | 1.805 |
| delta_Rv3811 | 1.396 | 2.589 |
| delta_Rv0954 | -2.35 | -0.057 |
| PonA1 | -2.984 | -0.269 |
| EccD1_KO | 0.76 | -1.365 |
| EspI_KO | 1.024 | -0.046 |
| PE35_KO | -1.397 | 1.356 |
| PPE68_KO | -0.205 | -0.31 |
| glycerol2 | -0.594 | -1.063 |
| lignocerate | -2.541 | -1.064 |
| oleate | -1.815 | -1.613 |
| phosphatidylcholine | -2.762 | -1.594 |
| acetate | 0.181 | -0.763 |
| glucAc | 0.362 | -0.3 |
| Rv0950ko | -3.86 | -2.406 |
| Rv1096ko | 2.796 | -0.036 |
| Rv3684ko | 1.29 | 0.416 |
| delta_otsA_trehalose | 0.193 | -2.168 |