Top 10 genes with highest correlation to Rv1053c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0984/moaB2 | (cc=0.5196) | info on Rv0984/moaB2 |
| Rv1735c/- | (cc=0.5154) | info on Rv1735c/- |
| Rv1052/- | (cc=0.5081) | info on Rv1052/- |
| Rv1734c/- | (cc=0.498) | info on Rv1734c/- |
| Rv0540/- | (cc=0.491) | info on Rv0540/- |
| Rv1357c/- | (cc=0.4746) | info on Rv1357c/- |
| Rv2958c/- | (cc=0.4712) | info on Rv2958c/- |
| Rv3607c/folB | (cc=0.4686) | info on Rv3607c/folB |
| Rv1989c/- | (cc=0.4633) | info on Rv1989c/- |
| Rv2030c/- | (cc=0.4614) | info on Rv2030c/- |
Correlation of Rv1053c/- with Rv1989c/-
Normalized LFCs for Rv1053c/-:
(description and provenance of datasets)
| Rv1053c/- | Rv1989c/- | |
| Fe_supp_jason_reseq | 3.157 | -0.633 |
| low_pH_jason_reseq | -0.586 | -0.243 |
| NO_jason_reseq | 0.215 | 0.446 |
| B6_jason_reseq | 1.558 | 0.514 |
| MHCII_jason_reseq | 1.647 | 0.217 |
| Isoniazid02 | 0.023 | 0.499 |
| Rifampicin4 | -0.374 | -0.915 |
| Ethambutol3 | 0.259 | 0.931 |
| Meropenem3 | 1.366 | -0.738 |
| Vancomycin16 | -0.088 | -0.26 |
| Rv2680_day32 | -0.332 | 0.615 |
| H37Rv_KO_MarP | -0.48 | 0.049 |
| hypoxia_3wks | 0.455 | -0.187 |
| hypoxia_6wks | -0.814 | -0.221 |
| glycerol | -1.483 | -1.791 |
| cholesterol | -0.441 | -0.893 |
| AJ | 0.318 | -0.034 |
| Bibs02 | 1.495 | 0.442 |
| Bibs02c | 0.476 | 0.138 |
| BL6 | -2.01 | -1.171 |
| BL6a | 0.019 | -0.36 |
| BXD01 | -0.658 | -0.451 |
| BXD010 | -2.179 | -1.432 |
| BXD011 | 0.413 | -0.947 |
| BXD03 | 0.38 | -0.586 |
| BXD04 | -0.409 | -0.24 |
| BXD05 | -0.275 | -0.529 |
| BXD06 | -0.653 | -1.085 |
| BXD07 | -0.251 | -0.764 |
| BXD08 | -0.532 | -0.912 |
| BXD09 | -0.582 | -0.975 |
| CAST | -0.287 | -0.087 |
| CCcont | -1.318 | -1.18 |
| DS01 | -0.597 | -0.05 |
| DS02 | 1.352 | 0.314 |
| DS04 | -0.329 | 0.008 |
| DS0c | 0.278 | -0.041 |
| GP01 | 0.72 | 0.022 |
| GP02 | 0.462 | 1.252 |
| GP0c | -0.313 | -0.335 |
| NOD | 0.973 | 0.221 |
| NZO | 0.406 | -0.452 |
| PWK | 1.965 | -0.121 |
| H37Rv_KO_CtpC | 1.897 | -0.824 |
| H37Rv_KO_CtpD | -2.035 | -0.613 |
| H37Rv_KO_Rv1272 | 2.117 | 0.126 |
| H37Rv_KO_SugABC | 0.951 | -0.039 |
| H37Rv_KO_MbtN | 0.981 | 0.025 |
| Trans05 | 0.64 | 0.533 |
| macrophage_unactivated | -1.392 | -0.546 |
| IL1 | -1.542 | -1.056 |
| Rapamycin | -1.679 | -1.114 |
| Tcell | -1.271 | -0.564 |
| GMCSF | 0.148 | -0.826 |
| IFNab | -2.911 | -0.602 |
| IFNg | -0.208 | 0.219 |
| IFNg_GMCSF1 | -0.503 | 0.053 |
| Rv1432_day32 | 0.784 | 0.493 |
| Rv1565c_day32 | 0.156 | 0.548 |
| secA2_input | -1.827 | -0.888 |
| delta_Rv3594 | 0.528 | 0.85 |
| delta_Rv3717 | 0.706 | 0.337 |
| delta_Rv3811 | 0.341 | 0.573 |
| delta_Rv0954 | -0.547 | 0.417 |
| PonA1 | -0.682 | 0.083 |
| EccD1_KO | 0.701 | 0.661 |
| EspI_KO | 0.582 | -0.114 |
| PE35_KO | 1.21 | 0.248 |
| PPE68_KO | 1.353 | -0.128 |
| glycerol2 | 0.056 | 0.083 |
| lignocerate | 1.36 | 0.153 |
| oleate | 0.251 | 0.349 |
| phosphatidylcholine | 0.469 | 0.218 |
| acetate | -0.853 | -0.472 |
| glucAc | -0.913 | -0.616 |
| Rv0950ko | -0.724 | 0.28 |
| Rv1096ko | -0.024 | 0.057 |
| Rv3684ko | 0.324 | -0.377 |
| delta_otsA_trehalose | 0.518 | 1.837 |