TnSeqCorr

Top 10 genes with highest correlation to Rv1051c/-:

update plotcorrelationlink to info on gene
Rv0971c/echA7 (cc=0.5574) info on Rv0971c/echA7
Rv2390c/- (cc=0.5491) info on Rv2390c/-
Rv3143/- (cc=0.5345) info on Rv3143/-
Rv1020/mfd (cc=0.5284) info on Rv1020/mfd
Rv1751/- (cc=0.5149) info on Rv1751/-
Rv3147/nuoC (cc=0.5134) info on Rv3147/nuoC
Rv3176c/mesT (cc=0.4928) info on Rv3176c/mesT
Rv0495c/- (cc=0.4858) info on Rv0495c/-
Rv0698/- (cc=0.4857) info on Rv0698/-
Rv0310c/- (cc=0.4809) info on Rv0310c/-

Correlation of Rv1051c/- with Rv1020/mfd

Normalized LFCs for Rv1051c/-:
(description and provenance of datasets)
Rv1051c/-Rv1020/mfd
Fe_supp_jason_reseq

-1.045

-0.436

low_pH_jason_reseq

-0.857

-0.097

NO_jason_reseq

0.488

-0.221

B6_jason_reseq

-2.276

-0.783

MHCII_jason_reseq

-2.004

-1.525

Isoniazid02

-0.297

0.124

Rifampicin4

0.249

-0.079

Ethambutol3

-0.474

0.984

Meropenem3

0.152

0.317

Vancomycin16

0.244

0.615

Rv2680_day32

2.224

-0.635

H37Rv_KO_MarP

-0.343

0.128

hypoxia_3wks

-0.096

-1.416

hypoxia_6wks

0.098

-1.305

glycerol

-0.291

0.794

cholesterol

0.14

0.514

AJ

-0.334

-0.188

Bibs02

1.386

0.401

Bibs02c

-1.314

0.243

BL6

2.642

1.214

BL6a

1.07

0.639

BXD01

1.147

0.377

BXD010

1.607

0.247

BXD011

1.404

0.805

BXD03

1.358

0.716

BXD04

1.853

0.613

BXD05

0.929

0.182

BXD06

2.123

0.967

BXD07

1.959

0.341

BXD08

1.557

1.15

BXD09

2.161

0.418

CAST

-0.938

0.486

CCcont

1.42

1.37

DS01

1.547

-0.248

DS02

-0.885

-0.454

DS04

4.721

1.248

DS0c

-0.074

-0.201

GP01

1.156

0.878

GP02

1.7

0.976

GP0c

1.958

0.689

NOD

-1.276

-0.659

NZO

0.682

-0.527

PWK

0.249

-0.067

H37Rv_KO_CtpC

0.973

1.15

H37Rv_KO_CtpD

-0.516

0.232

H37Rv_KO_Rv1272

1.2

0.177

H37Rv_KO_SugABC

1.843

0.583

H37Rv_KO_MbtN

-0.527

0.263

Trans05

0.509

0.367

macrophage_unactivated

0.215

-0.47

IL1

0.575

0.219

Rapamycin

0.954

0.252

Tcell

0.671

0.029

GMCSF

-1.001

-0.42

IFNab

0.323

0.46

IFNg

0.74

-0.289

IFNg_GMCSF1

-0.179

0.173

Rv1432_day32

0.18

-0.545

Rv1565c_day32

-0.747

-0.123

secA2_input

-0.318

0.776

delta_Rv3594

0.119

-0.431

delta_Rv3717

-0.457

-0.184

delta_Rv3811

-1.157

-0.543

delta_Rv0954

0.243

-0.058

PonA1

1.767

0.525

EccD1_KO

-1.194

0.145

EspI_KO

-0.616

0.479

PE35_KO

-0.767

0.053

PPE68_KO

-1.683

0.195

glycerol2

0.68

-0.069

lignocerate

1.987

0.212

oleate

-1.71

-0.242

phosphatidylcholine

1.367

-0.153

acetate

2.608

0.57

glucAc

1.964

0.361

Rv0950ko

0.552

0.678

Rv1096ko

2.247

0.742

Rv3684ko

0.0

0.593

delta_otsA_trehalose

0.02

-0.604