Top 10 genes with highest correlation to Rv1026/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0150c/- | (cc=0.5282) | info on Rv0150c/- |
| Rv1055/- | (cc=0.484) | info on Rv1055/- |
| Rv2219A/- | (cc=0.4539) | info on Rv2219A/- |
| Rv1897c/- | (cc=0.4283) | info on Rv1897c/- |
| Rv0677c/mmpS5 | (cc=0.4279) | info on Rv0677c/mmpS5 |
| Rv0779c/- | (cc=0.4254) | info on Rv0779c/- |
| Rv1341/- | (cc=0.4149) | info on Rv1341/- |
| Rv3178/- | (cc=0.4143) | info on Rv3178/- |
| Rv0500A/- | (cc=0.4106) | info on Rv0500A/- |
| Rv0321/dcd | (cc=0.3947) | info on Rv0321/dcd |
Correlation of Rv1026/- with Rv3178/-
Normalized LFCs for Rv1026/-:
(description and provenance of datasets)
| Rv1026/- | Rv3178/- | |
| Fe_supp_jason_reseq | -0.715 | 0.0 |
| low_pH_jason_reseq | 2.175 | 0.288 |
| NO_jason_reseq | -0.633 | -0.446 |
| B6_jason_reseq | -0.128 | -1.759 |
| MHCII_jason_reseq | -1.213 | -1.728 |
| Isoniazid02 | 0.146 | -0.019 |
| Rifampicin4 | 1.394 | -0.363 |
| Ethambutol3 | 0.235 | -0.672 |
| Meropenem3 | 0.12 | 0.06 |
| Vancomycin16 | -0.284 | 0.133 |
| Rv2680_day32 | 0.0 | 0.076 |
| H37Rv_KO_MarP | 0.385 | -0.246 |
| hypoxia_3wks | 0.339 | 0.486 |
| hypoxia_6wks | -0.606 | -0.033 |
| glycerol | 0.451 | -1.391 |
| cholesterol | 0.638 | -0.244 |
| AJ | 0.698 | 0.055 |
| Bibs02 | -1.069 | -1.911 |
| Bibs02c | 0.293 | -1.3 |
| BL6 | -0.845 | -2.134 |
| BL6a | 0.595 | 0.161 |
| BXD01 | 0.343 | 0.426 |
| BXD010 | -0.749 | 0.674 |
| BXD011 | -0.281 | 0.689 |
| BXD03 | 1.386 | 1.17 |
| BXD04 | 0.372 | 0.925 |
| BXD05 | -0.216 | 1.046 |
| BXD06 | 0.752 | 1.467 |
| BXD07 | 0.0 | 0.286 |
| BXD08 | 0.243 | 0.661 |
| BXD09 | 1.789 | 1.052 |
| CAST | 0.514 | -0.389 |
| CCcont | -1.009 | -1.213 |
| DS01 | 1.189 | -0.207 |
| DS02 | 0.397 | -0.43 |
| DS04 | 0.354 | -0.274 |
| DS0c | 1.403 | -0.558 |
| GP01 | -0.667 | 1.493 |
| GP02 | -0.562 | -0.499 |
| GP0c | 1.693 | 0.09 |
| NOD | -0.234 | -1.347 |
| NZO | -0.101 | 0.432 |
| PWK | -0.557 | -1.398 |
| H37Rv_KO_CtpC | -0.461 | 1.234 |
| H37Rv_KO_CtpD | 0.061 | -1.705 |
| H37Rv_KO_Rv1272 | -1.093 | 2.281 |
| H37Rv_KO_SugABC | -0.579 | 0.591 |
| H37Rv_KO_MbtN | -0.799 | 0.97 |
| Trans05 | -0.883 | 1.19 |
| macrophage_unactivated | 1.49 | -0.511 |
| IL1 | -0.285 | -0.261 |
| Rapamycin | 0.902 | 0.304 |
| Tcell | -0.313 | 0.349 |
| GMCSF | 1.156 | -0.689 |
| IFNab | 0.139 | 0.487 |
| IFNg | 0.577 | -1.518 |
| IFNg_GMCSF1 | 0.418 | -0.333 |
| Rv1432_day32 | 1.265 | 0.18 |
| Rv1565c_day32 | 0.0 | 0.336 |
| secA2_input | -1.796 | -1.589 |
| delta_Rv3594 | 0.997 | 1.646 |
| delta_Rv3717 | 2.702 | 1.749 |
| delta_Rv3811 | 2.198 | 1.515 |
| delta_Rv0954 | 0.925 | 0.523 |
| PonA1 | 0.419 | 0.964 |
| EccD1_KO | 0.395 | -1.016 |
| EspI_KO | -0.183 | -0.881 |
| PE35_KO | -1.272 | -0.426 |
| PPE68_KO | 0.0 | -0.166 |
| glycerol2 | -1.572 | -0.563 |
| lignocerate | -1.266 | -1.041 |
| oleate | 0.308 | 0.125 |
| phosphatidylcholine | -1.144 | -0.573 |
| acetate | -2.331 | -1.672 |
| glucAc | -1.952 | -2.061 |
| Rv0950ko | -0.172 | 1.981 |
| Rv1096ko | 0.477 | 1.571 |
| Rv3684ko | 1.916 | 2.116 |
| delta_otsA_trehalose | 1.321 | 2.708 |