Top 10 genes with highest correlation to Rv1026/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0150c/- | (cc=0.5282) | info on Rv0150c/- |
| Rv1055/- | (cc=0.484) | info on Rv1055/- |
| Rv2219A/- | (cc=0.4539) | info on Rv2219A/- |
| Rv1897c/- | (cc=0.4283) | info on Rv1897c/- |
| Rv0677c/mmpS5 | (cc=0.4279) | info on Rv0677c/mmpS5 |
| Rv0779c/- | (cc=0.4254) | info on Rv0779c/- |
| Rv1341/- | (cc=0.4149) | info on Rv1341/- |
| Rv3178/- | (cc=0.4143) | info on Rv3178/- |
| Rv0500A/- | (cc=0.4106) | info on Rv0500A/- |
| Rv0321/dcd | (cc=0.3947) | info on Rv0321/dcd |
Correlation of Rv1026/- with Rv0677c/mmpS5
Normalized LFCs for Rv1026/-:
(description and provenance of datasets)
| Rv1026/- | Rv0677c/mmpS5 | |
| Fe_supp_jason_reseq | -0.715 | 0.357 |
| low_pH_jason_reseq | 2.175 | -0.286 |
| NO_jason_reseq | -0.633 | -0.79 |
| B6_jason_reseq | -0.128 | -0.236 |
| MHCII_jason_reseq | -1.213 | -1.056 |
| Isoniazid02 | 0.146 | 0.028 |
| Rifampicin4 | 1.394 | 0.135 |
| Ethambutol3 | 0.235 | 1.516 |
| Meropenem3 | 0.12 | 0.846 |
| Vancomycin16 | -0.284 | -0.241 |
| Rv2680_day32 | 0.0 | -0.947 |
| H37Rv_KO_MarP | 0.385 | 0.387 |
| hypoxia_3wks | 0.339 | 0.327 |
| hypoxia_6wks | -0.606 | -0.641 |
| glycerol | 0.451 | -2.384 |
| cholesterol | 0.638 | -2.068 |
| AJ | 0.698 | 0.303 |
| Bibs02 | -1.069 | -0.58 |
| Bibs02c | 0.293 | 1.222 |
| BL6 | -0.845 | -2.709 |
| BL6a | 0.595 | 0.948 |
| BXD01 | 0.343 | -0.293 |
| BXD010 | -0.749 | -0.382 |
| BXD011 | -0.281 | 0.104 |
| BXD03 | 1.386 | -0.217 |
| BXD04 | 0.372 | -0.447 |
| BXD05 | -0.216 | 0.689 |
| BXD06 | 0.752 | -0.58 |
| BXD07 | 0.0 | -0.936 |
| BXD08 | 0.243 | -0.682 |
| BXD09 | 1.789 | 0.148 |
| CAST | 0.514 | 0.264 |
| CCcont | -1.009 | -2.355 |
| DS01 | 1.189 | 0.802 |
| DS02 | 0.397 | -0.499 |
| DS04 | 0.354 | 1.37 |
| DS0c | 1.403 | 0.349 |
| GP01 | -0.667 | -1.113 |
| GP02 | -0.562 | -1.368 |
| GP0c | 1.693 | -0.381 |
| NOD | -0.234 | -0.049 |
| NZO | -0.101 | 0.48 |
| PWK | -0.557 | 0.531 |
| H37Rv_KO_CtpC | -0.461 | -1.065 |
| H37Rv_KO_CtpD | 0.061 | 0.646 |
| H37Rv_KO_Rv1272 | -1.093 | -0.222 |
| H37Rv_KO_SugABC | -0.579 | -0.055 |
| H37Rv_KO_MbtN | -0.799 | -1.516 |
| Trans05 | -0.883 | -0.655 |
| macrophage_unactivated | 1.49 | 0.0 |
| IL1 | -0.285 | 0.89 |
| Rapamycin | 0.902 | 1.335 |
| Tcell | -0.313 | 0.15 |
| GMCSF | 1.156 | 0.053 |
| IFNab | 0.139 | 0.496 |
| IFNg | 0.577 | -0.163 |
| IFNg_GMCSF1 | 0.418 | -0.236 |
| Rv1432_day32 | 1.265 | -0.012 |
| Rv1565c_day32 | 0.0 | 0.575 |
| secA2_input | -1.796 | 0.7 |
| delta_Rv3594 | 0.997 | 1.715 |
| delta_Rv3717 | 2.702 | 0.946 |
| delta_Rv3811 | 2.198 | 1.401 |
| delta_Rv0954 | 0.925 | 1.522 |
| PonA1 | 0.419 | 2.022 |
| EccD1_KO | 0.395 | -0.562 |
| EspI_KO | -0.183 | -0.753 |
| PE35_KO | -1.272 | -0.846 |
| PPE68_KO | 0.0 | -0.909 |
| glycerol2 | -1.572 | -3.496 |
| lignocerate | -1.266 | -1.743 |
| oleate | 0.308 | -4.065 |
| phosphatidylcholine | -1.144 | -1.274 |
| acetate | -2.331 | -0.638 |
| glucAc | -1.952 | -3.253 |
| Rv0950ko | -0.172 | -0.492 |
| Rv1096ko | 0.477 | 0.878 |
| Rv3684ko | 1.916 | -0.93 |
| delta_otsA_trehalose | 1.321 | 1.185 |