Top 10 genes with highest correlation to Rv0990c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2505c/fadD35 | (cc=0.5406) | info on Rv2505c/fadD35 |
| Rv2201/asnB | (cc=0.5083) | info on Rv2201/asnB |
| Rv3519/- | (cc=0.5039) | info on Rv3519/- |
| Rv1023/eno | (cc=0.4838) | info on Rv1023/eno |
| Rv2063/mazE7 | (cc=0.4697) | info on Rv2063/mazE7 |
| Rv1711/- | (cc=0.4576) | info on Rv1711/- |
| Rv3032/- | (cc=0.4449) | info on Rv3032/- |
| Rv2581c/- | (cc=0.4434) | info on Rv2581c/- |
| Rv2169c/- | (cc=0.4408) | info on Rv2169c/- |
| Rv0130/htdZ | (cc=0.4354) | info on Rv0130/htdZ |
Correlation of Rv0990c/- with Rv2201/asnB
Normalized LFCs for Rv0990c/-:
(description and provenance of datasets)
| Rv0990c/- | Rv2201/asnB | |
| Fe_supp_jason_reseq | -1.389 | 0.218 |
| low_pH_jason_reseq | 0.683 | 0.0 |
| NO_jason_reseq | -0.499 | 0.0 |
| B6_jason_reseq | 0.178 | 0.538 |
| MHCII_jason_reseq | 0.942 | 0.0 |
| Isoniazid02 | -0.138 | -0.281 |
| Rifampicin4 | -0.455 | -0.252 |
| Ethambutol3 | 0.315 | -0.235 |
| Meropenem3 | 0.359 | -0.359 |
| Vancomycin16 | -0.066 | -0.512 |
| Rv2680_day32 | -0.444 | 0.131 |
| H37Rv_KO_MarP | -0.179 | -0.34 |
| hypoxia_3wks | -0.514 | 0.0 |
| hypoxia_6wks | -0.963 | 0.0 |
| glycerol | 0.19 | 0.0 |
| cholesterol | -0.302 | 0.132 |
| AJ | 0.459 | -0.232 |
| Bibs02 | -0.261 | -0.183 |
| Bibs02c | -0.605 | 0.191 |
| BL6 | 0.157 | -0.125 |
| BL6a | 0.082 | 0.0 |
| BXD01 | -0.413 | -0.13 |
| BXD010 | 0.199 | -0.128 |
| BXD011 | 0.476 | -0.127 |
| BXD03 | -0.204 | -0.135 |
| BXD04 | -0.837 | -0.124 |
| BXD05 | -0.757 | -0.135 |
| BXD06 | -0.475 | -0.133 |
| BXD07 | -0.338 | -0.138 |
| BXD08 | -0.312 | -0.133 |
| BXD09 | -0.472 | -0.14 |
| CAST | -0.582 | -0.23 |
| CCcont | -0.312 | -0.149 |
| DS01 | 0.311 | 0.926 |
| DS02 | 0.624 | 0.199 |
| DS04 | 0.514 | 0.489 |
| DS0c | 0.679 | 0.0 |
| GP01 | 0.16 | -0.099 |
| GP02 | 0.23 | -0.083 |
| GP0c | 0.479 | 0.119 |
| NOD | 0.225 | -0.225 |
| NZO | 1.087 | 0.0 |
| PWK | 0.014 | -0.196 |
| H37Rv_KO_CtpC | 0.244 | 0.927 |
| H37Rv_KO_CtpD | 0.22 | -0.127 |
| H37Rv_KO_Rv1272 | -0.271 | 0.129 |
| H37Rv_KO_SugABC | 0.403 | -0.099 |
| H37Rv_KO_MbtN | 0.579 | -0.103 |
| Trans05 | 0.947 | 0.228 |
| macrophage_unactivated | 0.06 | 0.0 |
| IL1 | 0.762 | 0.0 |
| Rapamycin | 0.737 | 0.0 |
| Tcell | -0.714 | 0.0 |
| GMCSF | -0.293 | 0.0 |
| IFNab | 0.284 | 0.0 |
| IFNg | 0.102 | 0.0 |
| IFNg_GMCSF1 | -0.06 | 0.0 |
| Rv1432_day32 | -0.227 | 0.0 |
| Rv1565c_day32 | -0.066 | -0.218 |
| secA2_input | -0.285 | 0.377 |
| delta_Rv3594 | -1.386 | 0.34 |
| delta_Rv3717 | -1.475 | -1.067 |
| delta_Rv3811 | -2.195 | -1.261 |
| delta_Rv0954 | -0.282 | -0.469 |
| PonA1 | -0.136 | -0.304 |
| EccD1_KO | 1.901 | 1.059 |
| EspI_KO | 2.935 | 0.918 |
| PE35_KO | 0.974 | 0.0 |
| PPE68_KO | 1.312 | 1.03 |
| glycerol2 | -1.819 | 0.0 |
| lignocerate | -0.437 | 0.0 |
| oleate | -0.486 | 0.0 |
| phosphatidylcholine | -0.916 | 0.0 |
| acetate | 0.06 | 0.0 |
| glucAc | -0.716 | 0.0 |
| Rv0950ko | -0.223 | 0.621 |
| Rv1096ko | -0.362 | -0.727 |
| Rv3684ko | 0.452 | 0.675 |
| delta_otsA_trehalose | -0.111 | -0.254 |