Top 10 genes with highest correlation to Rv0989c/grcC2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1745c/idi | (cc=0.7969) | info on Rv1745c/idi |
| Rv0820/phoT | (cc=0.7936) | info on Rv0820/phoT |
| Rv0929/pstC2 | (cc=0.7603) | info on Rv0929/pstC2 |
| Rv0930/pstA1 | (cc=0.755) | info on Rv0930/pstA1 |
| Rv0928/pstS3 | (cc=0.7351) | info on Rv0928/pstS3 |
| Rv0924c/mntH | (cc=0.7261) | info on Rv0924c/mntH |
| Rv1633/uvrB | (cc=0.6874) | info on Rv1633/uvrB |
| Rv2004c/- | (cc=0.6765) | info on Rv2004c/- |
| Rv2922c/smc | (cc=0.6612) | info on Rv2922c/smc |
| Rv1364c/- | (cc=0.6482) | info on Rv1364c/- |
Correlation of Rv0989c/grcC2 with Rv2004c/-
Normalized LFCs for Rv0989c/grcC2:
(description and provenance of datasets)
| Rv0989c/grcC2 | Rv2004c/- | |
| Fe_supp_jason_reseq | 2.609 | 0.655 |
| low_pH_jason_reseq | 2.831 | 0.592 |
| NO_jason_reseq | -0.286 | 0.0 |
| B6_jason_reseq | 2.136 | 0.526 |
| MHCII_jason_reseq | 1.703 | 2.331 |
| Isoniazid02 | 0.802 | -1.48 |
| Rifampicin4 | 0.217 | -1.4 |
| Ethambutol3 | 0.289 | -1.418 |
| Meropenem3 | 0.65 | -1.157 |
| Vancomycin16 | 0.032 | -1.149 |
| Rv2680_day32 | 3.948 | 0.608 |
| H37Rv_KO_MarP | -1.853 | -0.936 |
| hypoxia_3wks | -1.519 | 0.969 |
| hypoxia_6wks | 0.451 | 0.236 |
| glycerol | 5.6 | 2.262 |
| cholesterol | 4.139 | 1.492 |
| AJ | 1.239 | 0.598 |
| Bibs02 | 4.78 | 0.898 |
| Bibs02c | 5.162 | 2.801 |
| BL6 | 4.615 | 0.982 |
| BL6a | 5.857 | 2.218 |
| BXD01 | 4.648 | 1.666 |
| BXD010 | 4.045 | 0.372 |
| BXD011 | 4.413 | 0.896 |
| BXD03 | 3.722 | 0.592 |
| BXD04 | 3.589 | 1.385 |
| BXD05 | 4.055 | 1.344 |
| BXD06 | 4.247 | 0.995 |
| BXD07 | 4.611 | 1.665 |
| BXD08 | 4.346 | 2.226 |
| BXD09 | 4.485 | 0.958 |
| CAST | 0.569 | -0.928 |
| CCcont | 4.359 | 1.202 |
| DS01 | 6.0 | 2.281 |
| DS02 | 6.0 | 1.435 |
| DS04 | 5.63 | 2.117 |
| DS0c | 5.646 | 1.788 |
| GP01 | 3.678 | 1.367 |
| GP02 | 3.906 | 1.104 |
| GP0c | 4.303 | 0.996 |
| NOD | -0.163 | -0.905 |
| NZO | 0.892 | -1.065 |
| PWK | 0.689 | -1.189 |
| H37Rv_KO_CtpC | 2.924 | 1.486 |
| H37Rv_KO_CtpD | 4.282 | 1.305 |
| H37Rv_KO_Rv1272 | 4.43 | 2.101 |
| H37Rv_KO_SugABC | 3.675 | 0.94 |
| H37Rv_KO_MbtN | 4.397 | 2.096 |
| Trans05 | 4.538 | 2.198 |
| macrophage_unactivated | 0.96 | 1.158 |
| IL1 | 0.629 | -0.872 |
| Rapamycin | -0.261 | 0.114 |
| Tcell | -0.704 | 0.58 |
| GMCSF | 0.652 | 0.38 |
| IFNab | 1.802 | 0.834 |
| IFNg | 0.179 | 0.198 |
| IFNg_GMCSF1 | -0.408 | -0.779 |
| Rv1432_day32 | 1.675 | 1.51 |
| Rv1565c_day32 | 4.63 | 0.0 |
| secA2_input | -0.294 | -0.294 |
| delta_Rv3594 | -0.381 | -0.171 |
| delta_Rv3717 | 0.414 | 0.162 |
| delta_Rv3811 | -0.211 | -0.123 |
| delta_Rv0954 | 0.074 | -1.835 |
| PonA1 | -0.892 | -1.597 |
| EccD1_KO | 0.069 | -0.414 |
| EspI_KO | 0.456 | 0.485 |
| PE35_KO | -0.642 | 0.572 |
| PPE68_KO | -0.352 | 1.254 |
| glycerol2 | -3.409 | 0.671 |
| lignocerate | -2.795 | 0.381 |
| oleate | -3.254 | -1.184 |
| phosphatidylcholine | -3.214 | 0.203 |
| acetate | 1.935 | 0.106 |
| glucAc | 0.795 | 0.324 |
| Rv0950ko | -0.585 | -0.087 |
| Rv1096ko | 0.136 | 0.721 |
| Rv3684ko | 0.124 | 0.0 |
| delta_otsA_trehalose | -1.113 | 0.353 |