Top 10 genes with highest correlation to Rv0989c/grcC2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1745c/idi | (cc=0.7969) | info on Rv1745c/idi |
| Rv0820/phoT | (cc=0.7936) | info on Rv0820/phoT |
| Rv0929/pstC2 | (cc=0.7603) | info on Rv0929/pstC2 |
| Rv0930/pstA1 | (cc=0.755) | info on Rv0930/pstA1 |
| Rv0928/pstS3 | (cc=0.7351) | info on Rv0928/pstS3 |
| Rv0924c/mntH | (cc=0.7261) | info on Rv0924c/mntH |
| Rv1633/uvrB | (cc=0.6874) | info on Rv1633/uvrB |
| Rv2004c/- | (cc=0.6765) | info on Rv2004c/- |
| Rv2922c/smc | (cc=0.6612) | info on Rv2922c/smc |
| Rv1364c/- | (cc=0.6482) | info on Rv1364c/- |
Correlation of Rv0989c/grcC2 with Rv0928/pstS3
Normalized LFCs for Rv0989c/grcC2:
(description and provenance of datasets)
| Rv0989c/grcC2 | Rv0928/pstS3 | |
| Fe_supp_jason_reseq | 2.609 | -3.391 |
| low_pH_jason_reseq | 2.831 | 1.549 |
| NO_jason_reseq | -0.286 | -3.363 |
| B6_jason_reseq | 2.136 | 0.406 |
| MHCII_jason_reseq | 1.703 | 0.372 |
| Isoniazid02 | 0.802 | 0.156 |
| Rifampicin4 | 0.217 | -4.059 |
| Ethambutol3 | 0.289 | -0.989 |
| Meropenem3 | 0.65 | -2.653 |
| Vancomycin16 | 0.032 | -2.26 |
| Rv2680_day32 | 3.948 | 3.982 |
| H37Rv_KO_MarP | -1.853 | -2.74 |
| hypoxia_3wks | -1.519 | -3.413 |
| hypoxia_6wks | 0.451 | 1.128 |
| glycerol | 5.6 | 4.051 |
| cholesterol | 4.139 | 3.767 |
| AJ | 1.239 | 1.99 |
| Bibs02 | 4.78 | 1.819 |
| Bibs02c | 5.162 | 2.23 |
| BL6 | 4.615 | 5.545 |
| BL6a | 5.857 | 6.0 |
| BXD01 | 4.648 | 6.0 |
| BXD010 | 4.045 | 6.0 |
| BXD011 | 4.413 | 6.0 |
| BXD03 | 3.722 | 5.608 |
| BXD04 | 3.589 | 6.0 |
| BXD05 | 4.055 | 6.0 |
| BXD06 | 4.247 | 6.0 |
| BXD07 | 4.611 | 6.0 |
| BXD08 | 4.346 | 6.0 |
| BXD09 | 4.485 | 6.0 |
| CAST | 0.569 | 2.334 |
| CCcont | 4.359 | 3.228 |
| DS01 | 6.0 | 0.0 |
| DS02 | 6.0 | 0.101 |
| DS04 | 5.63 | 2.0 |
| DS0c | 5.646 | 1.053 |
| GP01 | 3.678 | 5.887 |
| GP02 | 3.906 | 5.592 |
| GP0c | 4.303 | 6.0 |
| NOD | -0.163 | 0.649 |
| NZO | 0.892 | 2.227 |
| PWK | 0.689 | 4.575 |
| H37Rv_KO_CtpC | 2.924 | 3.13 |
| H37Rv_KO_CtpD | 4.282 | 1.414 |
| H37Rv_KO_Rv1272 | 4.43 | 4.357 |
| H37Rv_KO_SugABC | 3.675 | 3.955 |
| H37Rv_KO_MbtN | 4.397 | 6.0 |
| Trans05 | 4.538 | 5.513 |
| macrophage_unactivated | 0.96 | -2.632 |
| IL1 | 0.629 | -3.073 |
| Rapamycin | -0.261 | -3.492 |
| Tcell | -0.704 | -2.47 |
| GMCSF | 0.652 | -3.11 |
| IFNab | 1.802 | 2.618 |
| IFNg | 0.179 | -5.161 |
| IFNg_GMCSF1 | -0.408 | -4.672 |
| Rv1432_day32 | 1.675 | 6.0 |
| Rv1565c_day32 | 4.63 | -0.314 |
| secA2_input | -0.294 | -1.969 |
| delta_Rv3594 | -0.381 | -0.055 |
| delta_Rv3717 | 0.414 | 2.024 |
| delta_Rv3811 | -0.211 | 0.581 |
| delta_Rv0954 | 0.074 | -3.635 |
| PonA1 | -0.892 | -3.624 |
| EccD1_KO | 0.069 | -2.447 |
| EspI_KO | 0.456 | -1.258 |
| PE35_KO | -0.642 | -0.557 |
| PPE68_KO | -0.352 | -1.51 |
| glycerol2 | -3.409 | -4.89 |
| lignocerate | -2.795 | -1.422 |
| oleate | -3.254 | -3.927 |
| phosphatidylcholine | -3.214 | -2.553 |
| acetate | 1.935 | -0.17 |
| glucAc | 0.795 | -0.089 |
| Rv0950ko | -0.585 | -3.986 |
| Rv1096ko | 0.136 | 1.674 |
| Rv3684ko | 0.124 | 0.082 |
| delta_otsA_trehalose | -1.113 | -0.532 |